Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 5.5e-201 704.9 621 100.0
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 6.0e-123 445.7 616 81.7
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 6.2e-120 435.6 612 81.7
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 6.8e-119 432.2 612 81.7
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 5.3e-79 299.7 551 77.7
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 5.3e-79 299.7 599 71.5
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 2.6e-78 297.4 548 76.3
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.3e-77 295.0 554 77.1
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 2.2e-77 294.3 548 76.8
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 2.5e-76 290.8 513 80.1
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.2e-76 290.0 599 72.1
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 4.2e-76 290.0 585 73.5
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 5.5e-76 289.7 578 73.7
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 7.2e-76 289.3 588 72.3
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 9.4e-76 288.9 582 72.7
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 2.7e-75 287.3 567 75.3
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 2.7e-75 287.3 591 71.6
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.8e-74 284.6 531 77.6
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 3.0e-74 283.9 530 77.4
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 6.7e-74 282.7 582 73.5
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.5e-73 281.6 542 76.0
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 2.5e-73 280.8 508 80.1
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 2.5e-73 280.8 552 75.7
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 3.3e-73 280.4 578 73.4
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 4.3e-73 280.0 547 75.1
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 5.7e-73 279.6 556 74.3
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 5.7e-73 279.6 558 73.7
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 7.4e-73 279.3 525 77.5
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.3e-72 278.5 581 72.6
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.7e-72 278.1 577 72.8
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 2.2e-72 277.7 505 79.8
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 2.2e-72 277.7 553 75.2
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.2e-72 277.7 600 69.8
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.8e-72 277.3 577 72.6
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 3.7e-72 276.9 571 73.2
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.7e-72 276.9 572 73.3
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 8.2e-72 275.8 577 73.7
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 1.8e-71 274.6 631 68.1
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 2.4e-71 274.2 550 75.3
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.4e-71 274.2 559 73.9
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 2.4e-71 274.2 576 73.4
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 2.4e-71 274.2 582 70.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 5.3e-71 273.1 550 75.3
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 5.3e-71 273.1 576 71.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 6.9e-71 272.7 607 69.4
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 1.2e-70 271.9 551 75.3
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 1.2e-70 271.9 551 75.3
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.2e-70 271.9 534 75.8
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 2.6e-70 270.8 582 72.0
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 2.6e-70 270.8 521 76.2
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 2.6e-70 270.8 534 75.7
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 3.4e-70 270.4 486 81.1
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 4.5e-70 270.0 622 67.7
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 4.5e-70 270.0 575 71.8
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 4.5e-70 270.0 496 79.8
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 5.9e-70 269.6 565 73.1
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.0e-69 268.9 547 73.3
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.3e-69 268.5 577 72.1
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.7e-69 268.1 537 76.0
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 2.9e-69 267.3 586 71.7
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 5.0e-69 266.5 527 75.5
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 5.0e-69 266.5 534 75.3
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.1e-68 265.4 479 82.5
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.4e-68 265.0 593 70.3
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.5e-68 263.1 574 72.3
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 7.2e-68 262.7 507 79.3
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 7.2e-68 262.7 608 68.4
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 7.2e-68 262.7 525 76.4
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 9.4e-68 262.3 599 53.8
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.6e-67 261.5 577 71.4
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 7.9e-67 259.2 587 70.5
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.0e-66 258.8 561 72.2
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 1.0e-66 258.8 534 74.3
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 1.4e-66 258.5 571 71.3
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 3.0e-66 257.3 544 75.6
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.9e-66 256.9 592 69.9
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 5.1e-66 256.5 472 81.1
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.1e-65 255.4 481 81.1
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.5e-65 255.0 546 74.9
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.0e-65 254.6 481 81.1
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 2.0e-65 254.6 520 65.8
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 7.4e-65 252.7 720 50.6
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 4.8e-64 250.0 625 42.6
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 6.3e-64 249.6 473 82.2
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.1e-63 248.8 467 82.2
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 5.3e-63 246.5 472 80.5
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.9e-60 238.0 589 68.9
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 5.5e-60 236.5 612 66.7
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 2.7e-59 234.2 483 38.7
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 6.7e-58 229.6 181 63.5
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.5e-57 228.4 474 80.0
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 2.2e-53 214.5 251 49.8
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 8.5e-53 212.6 248 49.6
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.9e-52 211.5 250 51.6
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 6.1e-51 206.5 245 51.4
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 6.1e-51 206.5 596 61.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.4e-50 205.3 211 54.0
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.2e-41 175.6 153 58.8
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 4.9e-40 170.2 578 64.7
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 2.0e-33 148.3 110 65.5
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 2.4e-31 141.4 110 64.5
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 3.2e-31 141.0 134 75.4
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 7.0e-31 139.8 201 43.8
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.1e-28 132.5 110 59.1
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 7.3e-28 129.8 110 61.8
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 2.6e-25 121.3 118 51.7
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.3e-24 119.0 80 71.2
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.4e-23 115.5 80 68.8
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 9.2e-23 112.8 127 52.8
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.3e-20 104.4 109 48.6
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 4.9e-16 90.5 121 41.3
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 6.4e-16 90.1 160 38.1
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 1.4e-15 89.0 119 45.4
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.5e-12 79.0 74 86.5
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 1.4e-10 72.4 111 41.4
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 5.2e-10 70.5 112 35.7
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 1.7e-08 65.5 37 73.0


User provided reference genes

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