Gene: SGA_v2.0_scaffold157G37400

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold157G37400
  • Transcript Identifier SGA_v2.0_scaffold157T37400
  • Gene Type Coding gene
  • Location scaffold157 : 628264-631463 : negative

Gene Family Information

  • ID HOM05D006900
  • #Genes/#Species 117/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product rRNA 2'-O-methyltransferase fibrillarin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006397
IEA
InterPromRNA processing
GO:0006396
ISO
PLAZA Integrative OrthologyRNA processing AT3G17040
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT3G17040
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT3G17040
GO:1901918
ISO
PLAZA Integrative Orthologynegative regulation of exoribonuclease activity AT3G17040
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT3G17040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
InterPromRNA binding
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT3G17040
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D006900
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT3G17040

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G17040
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G17040
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G17040
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G17040
GO:0031969
ISO
PLAZA Integrative Orthologychloroplast membrane AT3G17040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007592 GLABROUS1 enhancer-binding protein family
IPR044624 Tetratricopeptide-like repeat protein Mbb1-like
Mapman id Description
35.2 not assigned.not annotate