Gene: Os03g0308800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0308800
  • Transcript Identifier Os03t0308800-02
  • Gene Type Coding gene
  • Location chr03 : 10995743-10997504 : negative

Gene Family Information

  • ID HOM05D006900
  • #Genes/#Species 117/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0308800-02
  • MSU-ID LOC_Os03g19560.3
  • MSU-ID LOC_Os03g19560.2
  • MSU-ID LOC_Os03g19560.1
  • uniprot Q10MH4

Descriptions

  • Description Tetratricopeptide-like helical domain containing protein.
  • Description Hypothetical conserved gene.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006397
IBA
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0006417
IBA
IEA
GOA Databaseregulation of translation
GO:0010114
IEA
GOA Databaseresponse to red light
GO:0009657
IEA
GOA Databaseplastid organization
GO:1901918
IEA
GOA Databasenegative regulation of exoribonuclease activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0005515
IEA
InterProprotein binding
GO:0003727
IBA
IEA
GOA Databasesingle-stranded RNA binding
GO:0043621
IEA
GOA Databaseprotein self-association

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
IEA
GOA Databasechloroplast envelope
GO:0009507
IBA
IEA
GOA Databasechloroplast
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0005774
IEA
GOA Databasevacuolar membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019734 Tetratricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR044624 Tetratricopeptide-like repeat protein Mbb1-like
IPR003107 HAT (Half-A-TPR) repeat
Mapman id Description
16.11.5.5 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial transcript stability factor (HCF107)