Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 6.9e-63 243.8 125 100.0
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 2.6e-17 92.4 78 64.1
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 5.8e-17 91.3 78 62.8
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 5.8e-17 91.3 78 62.8
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 7.5e-17 90.9 108 50.0
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 9.8e-17 90.5 108 50.0
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.3e-16 90.1 78 61.5
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 2.9e-16 89.0 78 60.3
Sed0024086 Sechium edule HOM05D001054 ORTHO05D373058 2.9e-16 89.0 114 51.8
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 4.9e-16 88.2 76 61.8
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.9e-16 88.2 76 61.8
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.9e-16 88.2 76 61.8
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.9e-16 88.2 76 61.8
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 4.9e-16 88.2 75 62.7
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 6.4e-16 87.8 108 48.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.4e-16 87.8 78 60.3
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.4e-15 86.7 78 59.0
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.4e-15 86.7 78 59.0
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.4e-15 86.7 78 59.0
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 5.4e-15 84.7 75 60.0
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 7.0e-15 84.3 78 56.4
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 7.0e-15 84.3 78 55.1
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.6e-14 83.2 86 50.0
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 1.6e-14 83.2 78 53.8
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 2.1e-14 82.8 78 55.1
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 2.1e-14 82.8 108 44.4
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 2.1e-14 82.8 108 44.4
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 2.7e-14 82.4 62 71.0
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 2.7e-14 82.4 78 53.8
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 2.7e-14 82.4 78 55.1
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 3.5e-14 82.0 62 71.0
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 3.5e-14 82.0 65 64.6
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 4.6e-14 81.6 78 53.8
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 4.6e-14 81.6 63 66.7
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 6.0e-14 81.3 63 65.1
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.0e-14 81.3 95 47.4
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 6.0e-14 81.3 95 47.4
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 6.0e-14 81.3 95 47.4
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 6.0e-14 81.3 65 66.2
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 6.0e-14 81.3 78 52.6
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 7.8e-14 80.9 104 45.2
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 1.0e-13 80.5 78 51.3
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.0e-13 80.5 78 51.3
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-13 80.1 63 66.7
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-13 80.1 63 66.7
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-13 80.1 63 66.7
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-13 80.1 63 66.7
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.3e-13 80.1 78 52.6
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.3e-13 80.1 78 50.0
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.3e-13 80.1 79 50.6
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.3e-13 80.1 79 50.6
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.3e-13 80.1 79 50.6
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.3e-13 80.1 97 46.4
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.7e-13 79.7 78 52.6
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 1.7e-13 79.7 78 52.6
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.7e-13 79.7 78 52.6
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.3e-13 79.3 95 46.3
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.3e-13 79.3 75 56.0
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 2.3e-13 79.3 65 63.1
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 2.3e-13 79.3 78 52.6
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 3.9e-13 78.6 65 64.6
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 5.1e-13 78.2 78 51.3
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 5.1e-13 78.2 78 52.6
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 5.1e-13 78.2 78 52.6
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 5.1e-13 78.2 78 52.6
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 6.6e-13 77.8 78 51.3
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 8.6e-13 77.4 80 50.0
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.1e-12 77.0 78 51.3
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.1e-12 77.0 78 51.3
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.5e-12 76.6 84 48.8
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.9e-12 76.3 78 50.0
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 3.3e-12 75.5 78 50.0
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 3.3e-12 75.5 63 61.9
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 4.3e-12 75.1 65 60.0
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 5.6e-12 74.7 65 66.2
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 7.3e-12 74.3 70 55.7
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 9.5e-12 73.9 97 44.3
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.6e-11 73.2 66 60.6
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.1e-11 72.8 65 56.9
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 2.8e-11 72.4 78 48.7
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 2.8e-11 72.4 77 48.1
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 2.8e-11 72.4 77 48.1
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 2.8e-11 72.4 65 56.9
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 3.6e-11 72.0 73 50.7
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 4.7e-11 71.6 65 55.4
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 4.7e-11 71.6 79 45.6
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 6.2e-11 71.2 78 48.7
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 6.2e-11 71.2 78 46.2
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 8.1e-11 70.9 61 60.7
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 8.1e-11 70.9 107 43.0
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 8.1e-11 70.9 73 50.7
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.1e-10 70.5 62 59.7
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.4e-10 70.1 65 58.5
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.4e-10 70.1 60 65.0
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.8e-10 69.7 78 47.4
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.8e-10 69.7 78 47.4
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.8e-10 69.7 73 54.8
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.8e-10 69.7 73 54.8
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.8e-10 69.7 62 58.1
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 2.3e-10 69.3 73 53.4
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 2.3e-10 69.3 73 53.4
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.3e-10 69.3 79 44.3
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 3.1e-10 68.9 78 44.9
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 6.8e-10 67.8 78 50.0
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 6.8e-10 67.8 78 44.9
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 8.9e-10 67.4 60 65.0
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 8.9e-10 67.4 78 47.4
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.5e-09 66.6 79 49.4
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 4.4e-09 65.1 62 61.3
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 4.4e-09 65.1 62 59.7
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.2e-08 62.8 107 37.4
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 6.0e-06 54.7 66 50.0


User provided reference genes

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