Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006377 Sechium edule HOM05D003800 ORTHO05D004549 1.2e-94 349.7 168 100.0
MELO3C010053.2 Cucumis melo HOM05D003800 ORTHO05D004549 9.9e-81 303.5 151 96.0
ClCG03G010650 Citrullus lanatus HOM05D003800 ORTHO05D004549 1.7e-80 302.8 151 96.0
CsaV3_1G044500 Cucumis sativus L. HOM05D003800 ORTHO05D004549 3.2e-79 298.5 151 95.4
Migut.F01872 Erythranthe guttata HOM05D003800 ORTHO05D004549 7.4e-76 287.3 151 90.7
DCAR_015080 Daucus carota HOM05D003800 ORTHO05D004549 1.3e-75 286.6 145 93.8
vmacro10405 Vaccinium macrocarpon HOM05D003800 ORTHO05D004549 1.6e-75 286.2 151 88.7
MSTRG.329 Avicennia marina HOM05D003800 ORTHO05D004549 8.1e-75 283.9 151 89.4
Cc09_g03670 Coffea canephora HOM05D003800 ORTHO05D004549 1.1e-74 283.5 151 88.1
Nitab4.5_0001435g0050 Nicotiana tabacum HOM05D003800 ORTHO05D004549 1.1e-74 283.5 151 88.1
TPR.G31802 Trifolium pratense HOM05D003800 ORTHO05D004549 1.1e-74 283.5 153 88.2
Nitab4.5_0000971g0070 Nicotiana tabacum HOM05D003800 ORTHO05D004549 1.8e-74 282.7 151 88.7
Oeu023172.1 Olea europaea HOM05D003800 ORTHO05D004549 1.8e-74 282.7 151 88.7
CSS0026150 Camellia sinensis var. sinensis HOM05D003800 ORTHO05D004549 2.4e-74 282.3 151 88.7
Dinv10508 Davidia involucrata HOM05D003800 ORTHO05D004549 2.4e-74 282.3 151 88.1
Lalb_Chr06g0168491 Lupinus albus HOM05D003800 ORTHO05D004549 2.4e-74 282.3 145 91.7
Solyc05g055760.3 Solanum lycopersicum HOM05D003800 ORTHO05D004549 2.4e-74 282.3 151 89.4
Sopen05g034170 Solanum pennellii HOM05D003800 ORTHO05D004549 2.4e-74 282.3 151 89.4
CAN.G694.23 Capsicum annuum HOM05D003800 ORTHO05D004549 3.1e-74 282.0 151 88.7
Actinidia38903 Actinidia chinensis HOM05D003800 ORTHO05D004549 4.0e-74 281.6 151 88.1
CAN.G694.24 Capsicum annuum HOM05D003800 ORTHO05D004549 4.0e-74 281.6 151 88.7
Rhsim09G0130100 Rhododendron simsii HOM05D003800 ORTHO05D004549 4.0e-74 281.6 151 87.4
Nitab4.5_0003099g0070 Nicotiana tabacum HOM05D003800 ORTHO05D004549 5.3e-74 281.2 151 88.7
Sopen04g025300 Solanum pennellii HOM05D003800 ORTHO05D004549 6.9e-74 280.8 151 87.4
PGSC0003DMG400023359 Solanum tuberosum HOM05D003800 ORTHO05D004549 6.9e-74 280.8 151 88.7
MSTRG.8210 Avicennia marina HOM05D003800 ORTHO05D004549 1.2e-73 280.0 151 88.1
Os07g0546000 Oryza sativa ssp. japonica HOM05D003800 ORTHO05D004549 1.2e-73 280.0 148 90.5
Peaxi162Scf00048g00815 Petunia axillaris HOM05D003800 ORTHO05D004549 1.2e-73 280.0 152 88.2
SGA_v2.0_scaffold340G49303 Striga asiatica HOM05D003800 ORTHO05D004549 1.2e-73 280.0 151 88.1
Cpa.g.sc1105.3 Carica papaya HOM05D003800 ORTHO05D004549 1.5e-73 279.6 151 89.4
Lalb_Chr01g0020421 Lupinus albus HOM05D003800 ORTHO05D004549 1.5e-73 279.6 145 91.0
MD04G1245100 Malus domestica HOM05D003800 ORTHO05D004549 1.5e-73 279.6 151 88.7
MD12G1086800 Malus domestica HOM05D003800 ORTHO05D004549 1.5e-73 279.6 151 88.7
PGR119G0297 Punica granatum HOM05D003800 ORTHO05D004549 1.5e-73 279.6 151 89.4
PGSC0003DMG400007268 Solanum tuberosum HOM05D003800 ORTHO05D004549 1.5e-73 279.6 151 87.4
Atru.chr12.1779 Acer truncatum HOM05D003800 ORTHO05D004549 2.0e-73 279.3 148 89.9
Ciclev10012312m.g Citrus clementina HOM05D003800 ORTHO05D004549 2.6e-73 278.9 151 88.1
Eucgr.A01783 Eucalyptus grandis HOM05D003800 ORTHO05D004549 2.6e-73 278.9 145 91.7
Peaxi162Scf00156g00114 Petunia axillaris HOM05D003800 ORTHO05D004549 2.6e-73 278.9 151 88.7
CSS0014154 Camellia sinensis var. sinensis HOM05D003800 ORTHO05D004549 3.4e-73 278.5 145 90.3
Lj1A574T25 Lonicera japonica HOM05D003800 ORTHO05D004549 3.4e-73 278.5 146 89.7
Solyc04g056390.3 Solanum lycopersicum HOM05D003800 ORTHO05D004549 3.4e-73 278.5 151 86.1
Actinidia06803 Actinidia chinensis HOM05D003800 ORTHO05D004549 5.8e-73 277.7 152 88.2
Psat3g138120 Pisum sativum HOM05D003800 ORTHO05D004549 5.8e-73 277.7 146 89.0
CiPaw.07G080800 Carya illinoinensis HOM05D003800 ORTHO05D004549 1.0e-72 276.9 151 88.1
Nn7g38203 Nelumbo nucifera HOM05D003800 ORTHO05D004549 1.0e-72 276.9 151 87.4
MSTRG.27390 Avicennia marina HOM05D003800 ORTHO05D004549 1.3e-72 276.6 150 86.0
Lj1g0015068 Lotus japonicus HOM05D003800 ORTHO05D004549 1.7e-72 276.2 145 89.7
RcHm_v2.0_Chr3g0447851 Rosa chinensis HOM05D003800 ORTHO05D004549 1.7e-72 276.2 145 90.3
Dinv29095 Davidia involucrata HOM05D003800 ORTHO05D004549 2.2e-72 275.8 149 87.2
QL08p020626 Quercus lobata HOM05D003800 ORTHO05D004549 2.2e-72 275.8 151 88.7
Actinidia03293 Actinidia chinensis HOM05D003800 ORTHO05D004549 2.9e-72 275.4 152 86.8
CiPaw.08G114800 Carya illinoinensis HOM05D003800 ORTHO05D004549 3.8e-72 275.0 151 87.4
AUR62000306 Chenopodium quinoa HOM05D003800 ORTHO05D004549 3.8e-72 275.0 151 86.1
Phvul.008G054025 Phaseolus vulgaris HOM05D003800 ORTHO05D004549 3.8e-72 275.0 145 89.7
Cfa006258 Carpinus fangiana HOM05D003800 ORTHO05D004549 4.9e-72 274.6 151 88.1
TAR365G0109 Trochodendron aralioides HOM05D003800 ORTHO05D004549 4.9e-72 274.6 152 88.8
PSO357G0181 Papaver somniferum HOM05D003800 ORTHO05D004549 6.5e-72 274.2 151 88.1
Prupe.6G361700 Prunus persica HOM05D003800 ORTHO05D004549 6.5e-72 274.2 145 89.0
PGR031G1622 Punica granatum HOM05D003800 ORTHO05D004549 6.5e-72 274.2 151 88.1
AUR62006651 Chenopodium quinoa HOM05D003800 ORTHO05D004549 8.4e-72 273.9 151 85.4
PSO017G2843 Papaver somniferum HOM05D003800 ORTHO05D004549 8.4e-72 273.9 159 81.8
PSO675G7217 Papaver somniferum HOM05D003800 ORTHO05D004549 8.4e-72 273.9 159 81.8
VMungo1383G1495 Vigna mungo HOM05D003800 ORTHO05D004549 8.4e-72 273.9 145 89.0
Ah.06g195450 Amaranthus hybridus HOM05D003800 ORTHO05D004549 1.1e-71 273.5 151 84.8
arahy.Tifrunner.gnm1.ann1.7Y2C76 Arachis hypogaea HOM05D003800 ORTHO05D004549 1.1e-71 273.5 148 87.2
FvH4_6g00470 Fragaria vesca HOM05D003800 ORTHO05D004549 1.1e-71 273.5 145 89.0
FAN05G4594 Fragaria x ananassa HOM05D003800 ORTHO05D004549 1.1e-71 273.5 145 89.0
FAN09G3800 Fragaria x ananassa HOM05D003800 ORTHO05D004549 1.1e-71 273.5 145 89.0
Glyma.18G242300 Glycine max HOM05D003800 ORTHO05D004549 1.1e-71 273.5 145 89.0
Medtr7g080060 Medicago truncatula HOM05D003800 ORTHO05D004549 1.1e-71 273.5 148 87.8
Eucgr.H01393 Eucalyptus grandis HOM05D003800 ORTHO05D004549 1.4e-71 273.1 150 88.0
Aqoxy2G04026 Aquilegia oxysepala HOM05D003800 ORTHO05D004549 1.9e-71 272.7 151 85.4
THA.LOC104802955 Tarenaya hassleriana HOM05D003800 ORTHO05D004549 1.9e-71 272.7 151 85.4
Zm00001eb323510 Zea mays HOM05D003800 ORTHO05D004549 1.9e-71 272.7 145 89.0
Sc09g0001450 Simmondsia chinensis HOM05D003800 ORTHO05D004549 2.5e-71 272.3 147 87.1
THA.LOC104820922 Tarenaya hassleriana HOM05D003800 ORTHO05D004549 2.5e-71 272.3 151 85.4
GSVIVG01019089001 Vitis vinifera HOM05D003800 ORTHO05D004549 2.5e-71 272.3 142 89.4
AT3G02780 Arabidopsis thaliana HOM05D003800 ORTHO05D004549 3.2e-71 271.9 145 88.3
CAN.G217.10 Capsicum annuum HOM05D003800 ORTHO05D004549 3.2e-71 271.9 149 86.6
Glyma.09G250200 Glycine max HOM05D003800 ORTHO05D004549 3.2e-71 271.9 145 88.3
EL10Ac4g09961 Beta vulgaris HOM05D003800 ORTHO05D004549 7.1e-71 270.8 151 84.8
Ah.04g158990 Amaranthus hybridus HOM05D003800 ORTHO05D004549 9.3e-71 270.4 151 84.1
AL6G27370 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 9.3e-71 270.4 145 87.6
MBI07_g36332_MAGBIO Magnolia biondii HOM05D003800 ORTHO05D004549 9.3e-71 270.4 151 84.8
BolC3t13395H Brassica oleracea HOM05D003800 ORTHO05D004549 1.2e-70 270.0 145 87.6
Migut.F02135 Erythranthe guttata HOM05D003800 ORTHO05D004549 1.2e-70 270.0 145 86.9
Manes.13G005300 Manihot esculenta HOM05D003800 ORTHO05D004549 1.2e-70 270.0 151 86.8
BcaC05g30511 Brassica carinata HOM05D003800 ORTHO05D004549 1.6e-70 269.6 145 87.6
A05p44340 Brassica napus HOM05D003800 ORTHO05D004549 1.6e-70 269.6 145 87.6
C09p75900 Brassica napus HOM05D003800 ORTHO05D004549 1.6e-70 269.6 145 87.6
BolC5t35067H Brassica oleracea HOM05D003800 ORTHO05D004549 1.6e-70 269.6 145 87.6
BraA06t23290Z Brassica rapa HOM05D003800 ORTHO05D004549 1.6e-70 269.6 145 87.6
HanXRQChr04g0095031 Helianthus annuus HOM05D003800 ORTHO05D004549 1.6e-70 269.6 151 86.1
Lsat_1_v5_gn_2_17540 Lactuca sativa HOM05D003800 ORTHO05D004549 1.6e-70 269.6 151 86.1
TAR636G3604 Trochodendron aralioides HOM05D003800 ORTHO05D004549 1.6e-70 269.6 141 90.1
ATR1145G078 Amborella trichopoda HOM05D003800 ORTHO05D004549 2.1e-70 269.2 151 83.4
A03p33110 Brassica napus HOM05D003800 ORTHO05D004549 2.1e-70 269.2 145 87.6
BraA03t12481Z Brassica rapa HOM05D003800 ORTHO05D004549 2.1e-70 269.2 145 87.6
Carub.0006s1463 Capsella rubella HOM05D003800 ORTHO05D004549 2.1e-70 269.2 145 86.9
Potri.019G053700 Populus trichocarpa HOM05D003800 ORTHO05D004549 2.1e-70 269.2 151 86.8
AL3G12190 Arabidopsis lyrata HOM05D003800 ORTHO05D004549 2.7e-70 268.9 145 87.6
AT5G16440 Arabidopsis thaliana HOM05D003800 ORTHO05D004549 2.7e-70 268.9 145 86.9
Manes.12G005500 Manihot esculenta HOM05D003800 ORTHO05D004549 2.7e-70 268.9 151 86.8
TWI75G1224 Tripterygium wilfordii HOM05D003800 ORTHO05D004549 2.7e-70 268.9 151 86.1
BraA03t10104Z Brassica rapa HOM05D003800 ORTHO05D004549 3.5e-70 268.5 151 84.8
C03p08990 Brassica napus HOM05D003800 ORTHO05D004549 4.6e-70 268.1 145 86.9
C03p40290 Brassica napus HOM05D003800 ORTHO05D004549 4.6e-70 268.1 145 86.9
BolC3t16294H Brassica oleracea HOM05D003800 ORTHO05D004549 4.6e-70 268.1 145 86.9
Thecc.05G194400 Theobroma cacao HOM05D003800 ORTHO05D004549 4.6e-70 268.1 151 86.8
BcaC05g30508 Brassica carinata HOM05D003800 ORTHO05D004549 6.0e-70 267.7 145 87.6
Sp3g01810 Schrenkiella parvula HOM05D003800 ORTHO05D004549 6.0e-70 267.7 145 87.6
CARHR196820 Cardamine hirsuta HOM05D003800 ORTHO05D004549 7.9e-70 267.3 145 86.2
Carub.0003s0188 Capsella rubella HOM05D003800 ORTHO05D004549 1.3e-69 266.5 145 86.9
Thhalv10020933m.g Eutrema salsugineum HOM05D003800 ORTHO05D004549 1.3e-69 266.5 145 86.9
TWI18G1194 Tripterygium wilfordii HOM05D003800 ORTHO05D004549 1.3e-69 266.5 151 85.4
HanXRQChr09g0257801 Helianthus annuus HOM05D003800 ORTHO05D004549 1.8e-69 266.2 145 85.5
ECA232G0651 Erigeron canadensis HOM05D003800 ORTHO05D004549 2.3e-69 265.8 145 86.2
Duzib128G1178 Durio zibethinus HOM05D003800 ORTHO05D004549 5.1e-69 264.6 145 86.9
Thhalv10014571m.g Eutrema salsugineum HOM05D003800 ORTHO05D004549 5.1e-69 264.6 145 85.5
BNapus_Darmor_BZH_scaffold_99p00290 Brassica napus HOM05D003800 ORTHO05D004549 6.7e-69 264.2 145 86.2
BcaB04g21400 Brassica carinata HOM05D003800 ORTHO05D004549 8.7e-69 263.8 145 86.2
CDE05G0693 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 8.7e-69 263.8 151 83.4
CDE05G3592 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 8.7e-69 263.8 151 83.4
ECA238G3407 Erigeron canadensis HOM05D003800 ORTHO05D004549 8.7e-69 263.8 151 84.1
SGA_v2.0_scaffold62G21505 Striga asiatica HOM05D003800 ORTHO05D004549 8.7e-69 263.8 175 74.3
CARHR076790 Cardamine hirsuta HOM05D003800 ORTHO05D004549 1.1e-68 263.5 145 85.5
Gohir.A08G225900 Gossypium hirsutum HOM05D003800 ORTHO05D004549 1.1e-68 263.5 151 84.8
Gorai.004G262800 Gossypium raimondii HOM05D003800 ORTHO05D004549 1.1e-68 263.5 151 84.8
Duzib177G0232 Durio zibethinus HOM05D003800 ORTHO05D004549 2.5e-68 262.3 145 85.5
ClCG11G010680 Citrullus lanatus HOM05D003800 ORTHO05D004549 3.3e-68 261.9 145 84.1
Os05g0413400 Oryza sativa ssp. japonica HOM05D003800 ORTHO05D004549 3.3e-68 261.9 145 84.8
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 4.3e-68 261.5 163 74.8
BcaNung04309 Brassica carinata HOM05D003800 ORTHO05D004549 5.7e-68 261.2 145 84.1
BolC1t05871H Brassica oleracea HOM05D003800 ORTHO05D004549 5.7e-68 261.2 145 84.1
SEGI_07465 Sequoiadendron giganteum HOM05D003800 ORTHO05D004549 9.6e-68 260.4 145 83.4
MELO3C008717.2 Cucumis melo HOM05D003800 ORTHO05D004549 1.3e-67 260.0 145 83.4
CsaV3_2G009720 Cucumis sativus L. HOM05D003800 ORTHO05D004549 1.6e-67 259.6 145 83.4
Gohir.D08G246300 Gossypium hirsutum HOM05D003800 ORTHO05D004549 2.1e-67 259.2 151 83.4
Sed0012073 Sechium edule HOM05D003800 ORTHO05D004549 2.1e-67 259.2 145 84.1
Aa31LG11G13220 Aethionema arabicum HOM05D003800 ORTHO05D004549 2.8e-67 258.8 146 80.8
Lsat_1_v5_gn_8_2340 Lactuca sativa HOM05D003800 ORTHO05D004549 2.8e-67 258.8 168 76.8
Zm00001eb349410 Zea mays HOM05D003800 ORTHO05D004549 2.8e-67 258.8 157 79.0
arahy.Tifrunner.gnm1.ann1.BW88YF Arachis hypogaea HOM05D003800 ORTHO05D004549 6.3e-67 257.7 173 74.6
Sp6g27750 Schrenkiella parvula HOM05D003800 ORTHO05D004549 1.4e-66 256.5 152 80.9
Nitab4.5_0000083g0120 Nicotiana tabacum HOM05D003800 ORTHO05D004549 2.4e-66 255.8 186 69.4
A03p07770 Brassica napus HOM05D003800 ORTHO05D004549 6.9e-66 254.2 151 82.1
PSO170G0032 Papaver somniferum HOM05D003800 ORTHO05D004549 9.0e-66 253.8 144 86.8
Aa31LG5G13250 Aethionema arabicum HOM05D003800 ORTHO05D004549 2.0e-65 252.7 145 84.8
FAN02G2831 Fragaria x ananassa HOM05D003800 ORTHO05D004549 3.4e-65 251.9 132 90.2
Sabra19G0062900 Salix brachista HOM05D003800 ORTHO05D004549 3.4e-65 251.9 178 72.5
Pp3c1_33430 Physcomitrium patens HOM05D003800 ORTHO05D004549 4.5e-65 251.5 143 83.9
BraA01t04615Z Brassica rapa HOM05D003800 ORTHO05D004549 3.8e-64 248.4 145 82.1
CDE02G3521 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 5.0e-64 248.1 149 77.9
unitig_61.g26276 Utricularia gibba HOM05D003800 ORTHO05D004549 1.4e-63 246.5 129 88.4
SMO367G0306 Selaginella moellendorffii HOM05D003800 ORTHO05D004549 1.6e-62 243.0 146 80.1
AagrBONN_evm.TU.Sc2ySwM_344.2844 Anthoceros agrestis HOM05D003800 ORTHO05D004549 2.7e-62 242.3 142 81.0
Mapoly0066s0080 Marchantia polymorpha HOM05D003800 ORTHO05D004549 2.7e-62 242.3 142 81.7
CBR_g48525 Chara braunii HOM05D003800 ORTHO05D004549 6.3e-59 231.1 149 72.5
BcaB04g19388 Brassica carinata HOM05D003800 ORTHO05D004549 3.2e-55 218.8 150 72.0
Haze_04560 Corylus avellana HOM05D003800 ORTHO05D004549 2.1e-54 216.1 114 90.4
Oeu046895.1 Olea europaea HOM05D003800 ORTHO05D004549 9.7e-52 207.2 108 90.7
MBI11_g44548_MAGBIO Magnolia biondii HOM05D003800 ORTHO05D004549 8.2e-51 204.1 110 85.5
FAN14G0085 Fragaria x ananassa HOM05D003800 ORTHO05D004549 1.7e-48 196.4 118 82.2
Ca_07990_v3 Cicer arietinum L. HOM05D003800 ORTHO05D004549 2.5e-47 192.6 155 65.2
Zm00001eb288110 Zea mays HOM05D003800 ORTHO05D004549 1.6e-46 189.9 120 78.3
PRCOL_00001613 Prasinoderma coloniale HOM05D003800 ORTHO05D004549 1.7e-40 169.9 144 59.0
Lju50C0T2 Lonicera japonica HOM05D003800 ORTHO05D004549 5.7e-36 154.8 80 87.5
MCO12G260 Micromonas commoda HOM05D003800 ORTHO05D004549 3.7e-35 152.1 155 52.9
HanXRQChr09g0257811 Helianthus annuus HOM05D003800 ORTHO05D004549 7.2e-31 137.9 110 64.5
BNapus_Darmor_BZH_scaffold_122p00270 Brassica napus HOM05D003800 ORTHO05D004549 2.6e-28 129.4 75 82.7
Cre11.g467544 Chlamydomonas reinhardtii HOM05D003800 ORTHO05D004549 4.4e-28 128.6 154 48.1
Haze_26091 Corylus avellana HOM05D003800 ORTHO05D004549 8.5e-24 114.4 155 41.9
FvH4_6g42310 Fragaria vesca HOM05D003800 ORTHO05D045511 1.0e-21 107.5 92 62.0
FAN14G4609 Fragaria x ananassa HOM05D003800 ORTHO05D045511 1.0e-21 107.5 92 62.0
CDE09G0057 Ceratophyllum demersum HOM05D003800 ORTHO05D004549 3.0e-21 105.9 70 70.0
CBR_g16018 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-18 97.4 149 38.9
Eucgr.A01782 Eucalyptus grandis HOM05D007208 ORTHO05D009090 1.8e-18 96.7 59 81.4
COL.COLO4_38023 Corchorus olitorius HOM05D003800 ORTHO05D004549 5.4e-18 95.1 46 93.5
PGSC0003DMG400012082 Solanum tuberosum HOM05D003800 ORTHO05D004549 2.4e-10 69.7 43 72.1


User provided reference genes

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