Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.3e-147 525.0 266 100.0
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.4e-145 519.6 266 98.9
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.9e-90 335.9 257 65.0
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 4.9e-90 335.1 261 64.8
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.9e-89 333.2 257 67.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.2e-88 330.5 259 64.9
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.2e-88 330.5 266 64.3
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.0e-88 329.7 259 64.5
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 6.0e-88 328.2 259 64.5
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.0e-87 327.4 259 64.5
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.7e-87 326.6 266 62.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.0e-87 325.9 232 68.5
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.0e-87 325.9 257 63.8
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 3.0e-87 325.9 262 62.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.9e-87 325.5 262 63.7
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.9e-87 325.5 257 63.8
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 8.6e-87 324.3 258 64.3
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.1e-86 323.9 250 66.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.9e-86 323.2 268 63.1
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.3e-86 322.4 264 61.4
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 3.3e-86 322.4 264 61.4
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.2e-85 320.5 257 63.0
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.1e-85 319.7 259 60.2
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 6.2e-85 318.2 260 62.7
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 6.2e-85 318.2 260 62.7
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.8e-84 316.6 261 64.0
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.8e-84 316.6 268 61.2
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.3e-84 316.2 264 60.6
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 3.1e-84 315.8 254 64.2
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 3.1e-84 315.8 257 61.1
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.0e-84 315.5 238 66.4
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 6.8e-84 314.7 261 61.3
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 8.9e-84 314.3 266 62.4
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.0e-83 313.2 261 64.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 5.8e-83 311.6 265 62.3
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 1.7e-82 310.1 283 58.3
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.2e-82 309.7 262 61.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.2e-82 309.7 260 63.1
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 2.9e-82 309.3 258 61.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 3.7e-82 308.9 259 60.6
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.7e-82 308.9 276 60.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 3.7e-82 308.9 261 59.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.7e-82 308.9 265 61.5
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.9e-82 308.5 230 67.4
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 4.9e-82 308.5 246 63.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 6.4e-82 308.1 258 61.2
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 3.2e-81 305.8 262 61.5
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 4.1e-81 305.4 246 63.4
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.6e-80 303.5 233 64.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.6e-80 303.5 258 60.1
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.1e-80 303.1 265 60.4
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.5e-80 302.4 268 59.0
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.1e-79 298.5 287 55.7
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 8.6e-79 297.7 258 60.1
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.5e-78 297.0 261 57.1
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.9e-78 296.6 274 56.9
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 2.5e-78 296.2 265 62.3
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 7.3e-78 294.7 262 57.6
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.2e-77 293.9 226 64.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.2e-77 293.9 262 57.6
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.6e-77 293.5 303 54.1
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.1e-77 293.1 260 57.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.6e-77 292.4 215 66.5
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.6e-77 292.4 207 68.6
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 3.6e-77 292.4 267 58.8
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-76 290.8 258 58.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.4e-76 290.4 258 58.5
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.4e-76 290.4 257 58.8
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 2.4e-76 289.7 228 63.6
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 4.0e-76 288.9 232 63.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.0e-75 286.6 351 46.2
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.4e-75 285.8 265 57.4
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 5.8e-75 285.0 266 57.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 6.4e-74 281.6 265 58.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 6.4e-74 281.6 239 61.1
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.1e-73 280.8 264 58.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.4e-73 279.6 266 55.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 5.4e-73 278.5 266 56.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 5.4e-73 278.5 261 55.6
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 7.1e-73 278.1 254 57.9
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 7.8e-72 274.6 262 54.6
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.3e-71 273.9 267 56.2
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-70 270.8 283 55.5
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 4.7e-69 265.4 266 54.1
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.1e-69 264.6 272 54.8
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 6.9e-68 261.5 266 53.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 7.6e-67 258.1 270 51.5
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.3e-66 257.3 268 52.2
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.7e-64 249.6 270 51.5
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.7e-64 249.6 270 51.5
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.7e-64 249.6 273 50.9
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 5.1e-63 245.4 236 52.5
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 4.3e-62 242.3 185 62.7
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 5.6e-62 241.9 227 59.0
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 4.8e-61 238.8 284 50.0
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 5.3e-60 235.3 266 49.6
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 3.8e-58 229.2 454 34.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.2e-57 225.7 262 50.0
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.7e-48 196.4 144 61.8
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.1e-45 186.8 158 55.1
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 7.6e-43 178.3 255 43.5
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 4.2e-41 172.6 156 61.5
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 7.9e-40 168.3 232 40.5
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.4e-35 152.9 260 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.0e-34 151.4 215 41.9
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.3e-29 134.4 95 62.1
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.4e-28 131.0 122 61.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.4e-28 130.2 96 62.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.5e-26 121.7 138 47.1
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.5e-19 100.9 220 29.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 8.5e-18 95.1 132 50.8
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.5e-18 95.1 125 46.4
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 8.5e-18 95.1 125 48.0
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 8.5e-18 95.1 264 28.8
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 5.5e-17 92.4 197 34.5
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.4e-15 87.8 75 54.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.3e-13 81.3 143 42.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 2.0e-11 73.9 95 49.5
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.5e-11 72.8 86 52.3
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 4.2e-09 66.2 62 48.4
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.6e-08 64.3 168 27.4


User provided reference genes

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