Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 5.7e-147 524.2 266 100.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.1e-145 518.5 266 98.9
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 9.8e-91 337.4 257 65.4
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 2.9e-90 335.9 261 65.1
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 6.4e-90 334.7 257 68.1
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 4.1e-89 332.0 259 65.3
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 4.1e-89 332.0 266 64.7
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 1.2e-88 330.5 259 64.9
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 2.0e-88 329.7 259 64.9
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.5e-88 328.9 259 64.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 4.6e-88 328.6 262 63.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.0e-88 328.2 266 63.2
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 6.0e-88 328.2 263 65.4
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.7e-87 326.6 232 69.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.7e-87 326.6 257 64.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.3e-87 326.2 257 64.2
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 3.0e-87 325.9 258 64.7
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 3.9e-87 325.5 250 67.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.1e-86 323.9 264 61.7
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.1e-86 323.9 264 61.7
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.1e-86 323.9 268 63.4
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 7.3e-86 321.2 259 60.6
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 7.3e-86 321.2 257 63.4
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.2e-85 320.5 268 61.9
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.1e-85 319.7 257 61.9
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-85 319.3 260 63.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.8e-85 319.3 260 63.1
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 4.7e-85 318.5 261 62.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.2e-85 318.2 254 64.6
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 8.1e-85 317.8 261 64.4
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 8.1e-85 317.8 264 61.0
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.4e-84 317.0 238 66.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 4.0e-84 315.5 266 62.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 8.9e-84 314.3 261 64.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.5e-83 313.5 265 62.6
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 2.6e-83 312.8 258 62.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 3.4e-83 312.4 262 61.8
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.4e-83 312.0 230 68.3
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.4e-83 312.0 260 63.5
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.4e-83 312.0 276 60.5
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 5.8e-83 311.6 258 62.0
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 7.5e-83 311.2 283 58.7
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.7e-82 310.1 246 63.4
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.7e-82 310.1 265 61.9
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.9e-82 309.3 262 62.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.9e-82 308.5 259 61.0
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 4.9e-82 308.5 261 60.2
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.4e-81 307.0 246 63.8
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 3.2e-81 305.8 233 65.2
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 3.2e-81 305.8 265 61.1
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 7.1e-81 304.7 258 60.5
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.6e-80 303.5 268 59.3
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 1.7e-79 300.1 274 57.3
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.0e-79 299.3 287 56.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 3.9e-79 298.9 258 60.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 5.1e-79 298.5 262 58.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 8.6e-79 297.7 261 57.5
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 8.6e-79 297.7 262 58.4
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.9e-78 296.6 265 62.6
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.5e-78 296.2 215 67.4
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 3.3e-78 295.8 260 58.1
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.3e-78 295.4 226 65.0
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 4.3e-78 295.4 258 59.3
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.3e-78 295.4 207 69.1
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 5.6e-78 295.0 258 59.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.2e-77 293.9 267 59.2
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.2e-77 293.9 303 54.5
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 2.8e-77 292.7 232 64.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 6.2e-77 291.6 257 59.1
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 8.1e-77 291.2 228 64.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 6.8e-76 288.1 351 46.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.2e-75 287.3 265 57.7
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.6e-75 286.2 266 57.9
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.7e-74 283.5 266 56.4
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.2e-74 283.1 265 58.5
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.2e-74 283.1 239 61.5
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 3.8e-74 282.3 264 58.7
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.8e-74 282.3 261 56.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.9e-73 280.0 266 56.4
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 4.1e-73 278.9 232 61.2
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.4e-73 278.5 262 55.3
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 4.6e-72 275.4 267 56.6
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.9e-71 272.3 283 55.8
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.3e-70 269.2 266 54.9
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 9.6e-70 267.7 272 55.1
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 2.1e-69 266.5 266 54.5
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.4e-68 263.1 270 52.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.2e-67 260.8 268 53.0
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.4e-65 253.1 273 51.6
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.2e-64 250.8 270 51.9
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.2e-64 250.8 270 51.9
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 7.8e-64 248.1 236 53.0
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.5e-62 243.8 185 63.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.5e-62 243.8 227 59.5
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 4.3e-62 242.3 284 50.7
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.4e-60 236.5 266 50.0
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 9.9e-59 231.1 454 34.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.7e-58 230.3 262 51.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 2.1e-48 196.8 144 61.8
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 7.4e-46 188.3 158 55.7
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 7.6e-43 178.3 255 44.3
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 3.2e-41 172.9 150 62.7
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 6.0e-40 168.7 215 40.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 3.4e-35 152.9 260 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.0e-34 151.4 215 41.4
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.3e-29 134.4 95 62.1
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.4e-28 130.2 96 62.5
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.4e-28 130.2 122 61.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.5e-26 121.7 138 47.1
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 5.3e-20 102.4 220 29.1
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.7e-18 97.4 264 28.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.9e-18 96.7 132 51.5
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.9e-18 96.7 125 47.2
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 2.9e-18 96.7 125 48.8
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 9.4e-17 91.7 168 35.7
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.4e-15 87.8 75 54.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.7e-13 80.9 143 42.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 7.0e-12 75.5 95 50.5
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.0e-11 73.9 86 53.5
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 4.2e-09 66.2 62 48.4
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.4e-09 65.1 168 27.4


User provided reference genes

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