Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.7e-198 696.0 419 100.0
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 3.1e-147 525.8 375 71.2
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.1e-136 490.7 309 76.7
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 2.4e-136 489.6 307 77.9
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 3.2e-136 489.2 308 77.3
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 2.1e-135 486.5 310 76.1
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 6.0e-135 485.0 305 77.4
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.0e-134 484.2 307 77.9
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 3.0e-134 482.6 305 75.4
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 3.9e-134 482.3 310 74.5
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 6.6e-134 481.5 301 77.1
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.9e-133 479.9 303 75.9
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.9e-133 479.9 384 65.1
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 2.5e-133 479.6 305 74.8
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 5.6e-133 478.4 307 74.3
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.3e-132 477.2 305 74.4
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.6e-132 476.9 310 75.2
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 4.8e-132 475.3 312 74.4
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 6.2e-132 474.9 308 75.3
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 2.4e-131 473.0 310 74.2
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 4.0e-131 472.2 310 73.2
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 9.0e-131 471.1 306 74.8
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.2e-130 470.7 306 74.5
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 2.6e-130 469.5 425 61.9
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 3.4e-130 469.2 309 72.8
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.4e-130 469.2 306 74.5
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 5.8e-130 468.4 310 74.2
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 9.9e-130 467.6 303 75.6
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.3e-129 467.2 310 73.5
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 2.2e-129 466.5 306 74.2
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 2.9e-129 466.1 308 74.7
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 8.4e-129 464.5 312 74.0
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.4e-128 463.8 310 73.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 2.4e-128 463.0 310 71.6
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 4.2e-128 462.2 293 76.5
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 4.2e-128 462.2 353 68.0
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 5.4e-128 461.8 309 73.1
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 1.0e-126 457.6 307 72.0
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.3e-126 457.2 304 72.7
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.8e-126 456.8 309 72.2
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 2.3e-126 456.4 311 73.3
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 3.9e-126 455.7 317 71.9
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 5.1e-126 455.3 301 71.8
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 6.7e-126 454.9 345 64.9
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 1.1e-125 454.1 314 72.0
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.9e-125 453.4 300 72.0
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 5.6e-125 451.8 313 71.9
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 7.4e-125 451.4 306 69.6
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 9.6e-125 451.1 306 70.3
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 6.2e-124 448.4 308 70.8
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 8.1e-124 448.0 301 71.1
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.1e-123 447.6 301 70.4
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 6.9e-123 444.9 305 73.8
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 9.0e-123 444.5 309 67.3
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.5e-122 443.7 305 70.5
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.5e-122 443.7 305 69.2
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 9.9e-122 441.0 303 70.6
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 2.2e-121 439.9 310 70.3
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 6.4e-121 438.3 305 70.2
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.9e-120 436.8 306 69.9
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.4e-120 436.4 306 71.2
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 1.2e-119 434.1 301 68.4
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 2.7e-119 433.0 294 71.8
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 3.5e-119 432.6 301 70.1
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 5.1e-118 428.7 294 70.4
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.1e-117 427.6 301 71.1
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.5e-117 427.2 311 67.5
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.9e-117 426.8 309 68.0
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 3.3e-117 426.0 310 66.8
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 5.6e-117 425.2 295 70.5
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 1.3e-116 424.1 294 69.7
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 2.1e-116 423.3 311 67.5
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 2.8e-116 422.9 296 69.9
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.4e-115 420.6 309 66.0
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 4.0e-115 419.1 294 68.7
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 4.0e-115 419.1 309 66.7
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 4.0e-115 419.1 309 66.7
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.2e-114 417.5 294 68.0
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.0e-114 416.8 263 76.0
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.6e-114 416.4 301 67.1
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 6.5e-113 411.8 276 100.0
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 4.2e-112 409.1 312 67.9
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.5e-109 400.6 317 63.4
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 4.1e-107 392.5 303 63.4
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.0e-105 387.9 322 61.8
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.8e-102 377.1 313 58.8
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.8e-102 377.1 313 58.8
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 3.0e-102 376.3 240 74.6
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 3.9e-102 375.9 319 60.2
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 7.4e-101 371.7 239 74.9
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 4.8e-100 369.0 239 74.1
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 3.4e-98 362.8 307 58.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 7.7e-98 361.7 234 74.4
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.3e-97 360.9 306 61.4
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.9e-97 359.8 244 72.1
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.6e-95 354.0 311 55.0
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.6e-95 352.8 241 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 6.1e-95 352.1 311 57.9
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 3.3e-93 346.3 308 57.1
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 3.7e-84 316.2 309 56.0
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 8.2e-76 288.5 178 75.3
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.1e-75 288.1 307 51.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 8.5e-73 278.5 259 56.8
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 5.5e-72 275.8 185 72.4
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 1.2e-71 274.6 181 70.7
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 5.2e-70 269.2 170 77.1
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 2.8e-60 236.9 361 39.1
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 3.7e-60 236.5 408 36.8
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.8e-55 220.3 139 73.4
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 4.4e-53 213.0 140 80.7
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 3.6e-47 193.4 151 64.2
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 6.4e-28 129.4 95 66.3
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 8.7e-25 119.0 235 34.5
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.7e-17 94.7 57 80.7
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 6.6e-17 92.8 53 81.1
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 5.6e-16 89.7 178 36.0
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 9.3e-11 72.4 158 29.1
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 1.4e-06 58.5 182 28.6
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 5.3e-06 56.6 164 30.5


User provided reference genes

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