Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 4.4e-141 504.6 251 100.0
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 3.4e-93 345.5 207 79.7
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.3e-87 327.0 204 78.9
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 4.5e-85 318.5 206 79.1
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 1.2e-77 293.9 182 74.7
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 2.0e-77 293.1 182 74.7
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 3.4e-77 292.4 220 65.9
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 5.8e-77 291.6 180 77.2
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.7e-76 290.0 180 76.7
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.7e-76 290.0 182 74.2
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 2.9e-76 289.3 172 80.2
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.9e-76 289.3 172 80.2
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 3.8e-76 288.9 171 81.3
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 3.8e-76 288.9 181 76.8
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 4.9e-76 288.5 171 81.3
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 4.9e-76 288.5 182 74.7
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 6.5e-76 288.1 182 74.7
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.1e-75 287.3 182 74.2
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.1e-75 287.3 201 68.7
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 1.4e-75 287.0 182 75.3
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.4e-75 287.0 182 74.2
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 2.5e-75 286.2 182 75.8
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 4.2e-75 285.4 171 80.1
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 7.1e-75 284.6 219 65.3
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 7.1e-75 284.6 200 69.5
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.6e-74 283.5 182 73.6
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 1.6e-74 283.5 195 69.7
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 3.5e-74 282.3 177 74.0
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 4.6e-74 282.0 179 73.7
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 4.6e-74 282.0 179 73.7
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 4.6e-74 282.0 182 73.1
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.3e-73 280.4 182 74.7
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.3e-73 280.4 182 73.1
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.8e-73 280.0 171 77.2
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.8e-73 280.0 182 72.0
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 1.8e-73 280.0 181 72.9
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.9e-73 278.9 178 73.6
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.7e-73 278.1 182 72.5
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.1e-72 277.3 173 72.8
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 1.9e-72 276.6 184 68.5
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 3.3e-72 275.8 182 73.1
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 3.3e-72 275.8 182 72.0
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 3.3e-72 275.8 171 76.6
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 4.3e-72 275.4 182 72.0
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 9.6e-72 274.2 183 69.9
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 9.6e-72 274.2 188 71.3
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 9.6e-72 274.2 179 71.5
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 9.6e-72 274.2 181 70.7
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.6e-71 273.5 210 63.8
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 2.8e-71 272.7 171 74.9
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 4.8e-71 271.9 171 74.9
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 8.2e-71 271.2 172 75.0
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 8.2e-71 271.2 171 76.0
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.1e-70 270.8 196 66.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 3.1e-70 269.2 171 74.3
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 4.1e-70 268.9 172 74.4
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 4.1e-70 268.9 171 74.3
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 9.0e-70 267.7 182 67.0
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.2e-69 267.3 173 74.0
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-69 266.9 173 74.0
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-69 266.9 173 74.0
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-69 266.9 173 74.0
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.5e-69 266.9 167 74.3
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.5e-69 266.9 170 74.1
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 2.0e-69 266.5 173 74.6
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.0e-69 266.5 189 69.8
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 2.0e-69 266.5 171 72.5
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 4.5e-69 265.4 171 73.1
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 4.5e-69 265.4 173 74.6
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 4.5e-69 265.4 172 74.4
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 4.5e-69 265.4 171 72.5
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 7.6e-69 264.6 189 67.2
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 7.6e-69 264.6 171 72.5
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.3e-68 263.8 166 72.3
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.3e-68 263.8 171 74.9
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 2.2e-68 263.1 211 64.9
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 1.4e-67 260.4 171 73.1
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 1.9e-67 260.0 218 60.1
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 3.2e-67 259.2 171 73.1
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 3.2e-67 259.2 171 72.5
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 5.5e-67 258.5 171 71.9
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 9.3e-67 257.7 181 66.3
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 9.3e-67 257.7 191 64.9
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 2.1e-66 256.5 171 70.8
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 3.5e-66 255.8 225 60.4
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 5.1e-65 251.9 170 69.4
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 2.5e-64 249.6 192 63.0
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 2.5e-64 249.6 181 70.2
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.8e-63 246.1 182 67.0
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 4.8e-63 245.4 170 68.8
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.4e-62 243.0 144 81.2
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 5.5e-59 231.9 169 65.1
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 7.2e-59 231.5 192 59.9
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 7.2e-59 231.5 190 59.5
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 6.1e-58 228.4 171 63.7
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 3.9e-57 225.7 223 53.4
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.0e-56 223.4 170 62.9
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 2.0e-56 223.4 170 62.9
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 5.7e-56 221.9 171 66.1
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 3.1e-54 216.1 182 57.7
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 9.1e-54 214.5 193 58.5
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.7e-47 192.6 116 75.9
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 4.8e-47 192.2 117 76.9
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.1e-46 191.0 151 60.3
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.4e-46 189.9 115 78.3
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 2.1e-42 176.8 116 72.4
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.0e-40 170.2 117 69.2
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 8.2e-39 164.9 156 51.9
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 7.7e-37 158.3 125 61.6
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.9e-20 103.2 57 86.0
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 6.6e-20 102.1 230 35.2
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 8.0e-18 95.1 53 79.2
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.2e-10 71.2 45 73.3
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.8e-10 70.1 164 29.3
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 4.7e-10 69.3 152 29.6
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 9.2e-06 55.1 41 58.5


User provided reference genes

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