Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.4e-87 326.2 170 100.0
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 8.0e-70 267.3 145 95.9
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 5.0e-48 194.9 146 70.5
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 8.9e-45 184.1 154 65.6
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.2e-43 179.5 151 66.2
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 4.0e-37 158.7 145 62.8
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 1.2e-36 157.1 165 58.2
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.9e-34 149.8 142 57.7
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 5.4e-34 148.3 152 57.2
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 9.2e-34 147.5 160 53.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.0e-32 144.1 156 55.8
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.3e-32 143.7 164 54.3
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 8.6e-32 141.0 155 56.8
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.9e-31 139.8 152 57.9
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.5e-31 139.4 146 55.5
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.5e-31 139.4 163 55.2
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 3.3e-31 139.0 166 53.6
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.3e-31 138.7 150 54.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 4.3e-31 138.7 144 55.6
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 4.3e-31 138.7 144 56.2
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 5.6e-31 138.3 154 57.1
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 5.6e-31 138.3 158 51.3
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 5.6e-31 138.3 159 55.3
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 7.3e-31 137.9 157 52.9
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 7.3e-31 137.9 149 55.7
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.2e-30 137.1 150 54.7
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.2e-30 137.1 151 58.3
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 2.1e-30 136.3 147 56.5
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.8e-30 136.0 146 56.2
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-30 136.0 146 56.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-30 136.0 146 56.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.8e-30 136.0 151 51.0
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 4.7e-30 135.2 144 55.6
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 8.1e-30 134.4 149 55.0
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 8.1e-30 134.4 147 55.8
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 8.1e-30 134.4 152 53.3
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.1e-29 134.0 146 55.5
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.1e-29 134.0 146 55.5
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.4e-29 133.7 158 52.5
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.3e-29 132.9 140 57.9
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 2.3e-29 132.9 141 58.2
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.3e-29 132.9 153 56.2
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 3.1e-29 132.5 160 50.0
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 5.2e-29 131.7 149 53.7
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.8e-29 131.3 148 52.7
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 8.9e-29 131.0 136 57.4
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.2e-28 130.6 151 49.7
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.2e-28 130.6 151 49.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.2e-28 130.6 149 53.0
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.2e-28 130.6 150 51.3
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.2e-28 130.6 159 51.6
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.2e-28 130.6 137 56.9
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 1.5e-28 130.2 147 53.1
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.5e-28 130.2 157 52.9
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 2.0e-28 129.8 150 54.0
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 2.6e-28 129.4 140 53.6
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 3.4e-28 129.0 151 49.0
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.4e-28 129.0 137 55.5
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 3.4e-28 129.0 162 48.8
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 5.8e-28 128.3 161 51.6
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 5.8e-28 128.3 149 52.3
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 7.6e-28 127.9 162 48.8
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.7e-27 126.7 150 53.3
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.7e-27 126.7 158 48.1
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 2.9e-27 125.9 140 55.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-27 125.9 144 51.4
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 3.8e-27 125.6 135 54.1
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 4.9e-27 125.2 147 50.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 6.4e-27 124.8 154 50.6
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 6.4e-27 124.8 147 55.1
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 8.4e-27 124.4 160 48.8
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.4e-26 122.9 158 48.1
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 2.4e-26 122.9 154 48.7
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 2.4e-26 122.9 154 48.7
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.2e-26 122.5 154 50.6
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.2e-25 120.6 147 49.0
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 2.7e-25 119.4 146 47.3
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 2.7e-25 119.4 157 49.0
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.7e-25 119.4 161 47.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 6.0e-25 118.2 147 49.7
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 1.3e-24 117.1 150 47.3
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.7e-24 116.7 168 42.9
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 1.7e-24 116.7 132 51.5
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 8.6e-24 114.4 162 46.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.9e-23 113.2 163 44.8
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 2.5e-23 112.8 157 45.9
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 3.3e-23 112.5 135 49.6
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 4.7e-22 108.6 172 43.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.7e-22 108.6 202 37.6
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 5.2e-21 105.1 144 47.9
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 3.4e-20 102.4 152 43.4
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.4e-20 102.4 144 47.9
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 2.2e-19 99.8 170 39.4
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.9e-18 96.7 201 34.8
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.0e-16 90.9 163 39.3
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 3.0e-16 89.4 113 43.4
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.3e-15 85.5 70 61.4
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 4.3e-15 85.5 90 51.1
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 5.6e-15 85.1 57 68.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.8e-14 82.0 70 61.4
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 8.1e-14 81.3 49 71.4
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-13 80.9 43 83.7
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-13 80.9 43 83.7
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 3.1e-13 79.3 169 36.7
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 5.3e-13 78.6 173 38.7
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.5e-12 75.5 39 84.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.3e-11 73.9 56 62.5
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.7e-11 73.6 35 88.6
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.9e-11 72.8 43 74.4
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.4e-10 70.5 52 51.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 4.6e-09 65.5 158 37.3
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.8e-08 63.5 41 65.9
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.9e-07 60.1 115 40.0
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.8e-06 56.2 147 31.3
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 4.8e-06 55.5 84 38.1


User provided reference genes

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