Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 0.0e+00 1092.0 529 100.0
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 8.6e-288 993.0 529 89.4
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 1.3e-283 979.2 533 87.8
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 3.5e-281 971.1 529 87.3
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 5.8e-276 953.7 530 86.2
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 7.5e-276 953.4 533 85.9
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 6.4e-275 950.3 532 85.2
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 7.8e-273 943.3 540 84.3
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 1.2e-270 936.0 529 84.1
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 2.8e-270 934.9 530 84.0
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 3.1e-269 931.4 529 83.7
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.2e-268 929.5 531 83.4
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 2.6e-268 928.3 529 83.4
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 5.8e-268 927.2 548 81.9
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.4e-266 921.8 530 82.8
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 5.4e-266 920.6 531 82.9
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 3.5e-265 917.9 539 82.6
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 4.6e-265 917.5 539 80.5
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 7.8e-265 916.8 526 82.9
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 7.8e-265 916.8 530 83.2
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 1.3e-264 916.0 520 83.3
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.3e-264 916.0 529 82.8
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.7e-264 915.6 531 82.3
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 3.9e-264 914.4 536 81.7
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 5.1e-264 914.1 529 82.8
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 6.2e-262 907.1 540 81.1
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 6.2e-262 907.1 536 82.1
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 1.4e-261 906.0 540 80.4
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.8e-261 905.6 531 81.5
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 2.3e-261 905.2 532 81.2
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 2.3e-261 905.2 535 79.8
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 3.1e-261 904.8 531 80.8
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 3.1e-261 904.8 535 80.6
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 4.4e-260 901.0 532 81.6
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 1.3e-259 899.4 541 80.6
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 1.7e-259 899.0 534 79.2
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.2e-259 898.7 541 79.3
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 2.9e-259 898.3 589 75.2
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 6.4e-259 897.1 539 80.5
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 6.4e-259 897.1 539 79.0
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.4e-258 896.0 537 80.8
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.9e-258 895.6 535 80.6
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.9e-258 895.6 544 79.0
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 1.9e-258 895.6 540 79.4
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 2.4e-258 895.2 533 79.7
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 5.4e-258 894.0 532 79.5
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.1e-257 892.1 517 81.2
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 2.1e-257 892.1 523 82.6
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 2.7e-257 891.7 535 79.3
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 2.7e-257 891.7 539 78.8
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 4.6e-257 891.0 542 80.1
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 4.6e-257 891.0 520 80.8
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.0e-256 889.8 537 80.1
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.3e-256 889.4 512 81.2
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 2.3e-256 888.6 532 79.9
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 3.0e-256 888.3 561 76.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.9e-256 887.9 557 77.6
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.6e-256 887.1 570 75.6
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 8.6e-256 886.7 537 79.9
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 1.1e-255 886.3 516 81.0
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.9e-255 885.6 517 80.7
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 1.9e-255 885.6 534 79.8
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 4.3e-255 884.4 520 80.2
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 4.3e-255 884.4 516 80.8
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 5.6e-255 884.0 591 74.1
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 7.3e-255 883.6 538 78.8
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 3.6e-254 881.3 520 80.0
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 1.4e-253 879.4 521 79.8
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 6.9e-253 877.1 520 79.4
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 5.8e-252 874.0 534 78.8
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 5.4e-250 867.5 555 76.8
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 5.4e-250 867.5 469 87.0
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 4.6e-249 864.4 535 78.7
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 6.0e-249 864.0 531 78.3
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 5.1e-248 860.9 534 77.7
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 8.7e-248 860.1 534 77.7
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.1e-247 859.8 536 76.9
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.1e-247 859.8 536 76.9
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 7.3e-247 857.1 537 76.9
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 2.8e-246 855.1 518 77.8
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.4e-245 852.8 523 80.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.8e-245 852.4 532 77.8
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.8e-245 852.4 539 76.3
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 3.1e-245 851.7 542 77.5
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.2e-244 849.7 544 76.7
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 9.9e-244 846.7 543 75.7
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.9e-242 842.4 495 80.0
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.8e-240 835.9 483 81.6
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 2.3e-240 835.5 531 76.5
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 3.9e-240 834.7 530 76.0
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 5.1e-240 834.3 515 76.9
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.5e-239 832.8 531 76.1
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 3.3e-239 831.6 536 75.7
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 2.9e-235 818.5 560 71.6
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 6.4e-235 817.4 547 73.9
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 6.4e-235 817.4 539 73.1
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 8.4e-235 817.0 545 72.8
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 3.2e-234 815.1 560 71.4
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 5.5e-234 814.3 545 72.8
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 7.9e-233 810.4 537 73.0
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 4.2e-226 788.1 536 72.0
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 3.0e-224 781.9 536 71.3
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.1e-222 775.8 535 71.0
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 6.9e-221 770.8 477 76.5
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 7.4e-215 750.7 398 85.9
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 9.1e-213 743.8 426 80.5
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 8.5e-211 737.3 535 67.7
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 3.2e-210 735.3 526 69.8
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.1e-207 726.9 462 75.5
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.9e-202 709.5 427 79.6
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 1.9e-194 682.9 408 81.6
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 5.7e-191 671.4 511 66.5
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.3e-184 649.4 332 89.2
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 4.0e-184 648.7 401 75.1
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 3.5e-156 555.8 283 88.7
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 2.8e-153 546.2 496 55.4
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.1e-152 544.3 473 56.7
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 8.9e-152 541.2 397 68.3
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 9.9e-151 537.7 385 69.1
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 2.5e-138 496.5 346 69.4
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 3.9e-131 472.6 407 59.0
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 9.6e-130 468.0 451 53.7
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 2.0e-127 460.3 451 50.1
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 6.9e-120 435.3 334 66.8
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 4.6e-108 396.0 269 73.2
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 7.9e-92 342.0 181 86.2
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.8e-88 330.9 230 75.2
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 1.7e-86 324.3 182 83.0
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.5e-77 294.7 228 64.0
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.1e-56 223.4 135 74.1
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.5e-45 188.3 115 77.4
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.5e-42 178.3 102 78.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 1.2e-34 152.1 81 85.2
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 2.5e-29 134.4 68 88.2
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 1.1e-21 109.0 58 86.2
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 3.3e-21 107.5 60 81.7
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 3.3e-21 107.5 60 81.7
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 3.6e-20 104.0 53 88.7
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 2.2e-17 94.7 50 84.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 1.1e-13 82.4 78 55.1


User provided reference genes

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