Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 6.8e-272 940.3 549 100.0
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 9.3e-144 514.6 582 53.4
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.2e-114 417.9 522 50.0
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.5e-112 410.2 554 50.0
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.5e-109 401.0 427 59.3
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 5.7e-109 399.1 427 59.3
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 2.4e-107 393.7 482 53.9
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 1.5e-106 391.0 534 45.1
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 1.3e-105 387.9 486 53.9
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 4.2e-104 382.9 475 54.1
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 7.0e-99 365.5 423 53.4
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 3.5e-98 363.2 583 47.3
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.9e-96 357.5 429 49.0
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.3e-92 344.7 638 40.0
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 2.4e-91 340.5 510 42.7
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 2.6e-90 337.0 560 43.2
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.0e-89 335.1 589 37.7
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 2.5e-88 330.5 423 50.8
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 1.8e-86 324.3 548 45.8
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 5.2e-86 322.8 487 51.1
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 6.8e-86 322.4 547 38.8
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.5e-85 321.2 536 45.0
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 2.0e-85 320.9 417 47.0
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.0e-81 308.5 566 37.6
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 2.9e-81 307.0 423 48.2
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 6.5e-81 305.8 582 44.2
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 8.5e-81 305.4 584 41.4
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.1e-80 305.1 583 38.3
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 2.6e-77 293.9 424 44.3
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.4e-77 293.5 434 44.5
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 4.9e-76 289.7 432 43.5
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.3e-76 289.3 471 40.6
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 8.3e-76 288.9 583 37.4
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.2e-74 285.0 436 47.7
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.0e-74 284.3 488 40.2
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.0e-73 282.0 516 35.9
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 2.3e-73 280.8 490 37.1
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 3.8e-73 280.0 423 49.9
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 3.8e-73 280.0 422 48.1
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 6.6e-73 279.3 466 48.9
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 2.5e-72 277.3 471 37.2
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 4.7e-71 273.1 533 39.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 1.0e-70 271.9 458 45.0
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.8e-70 271.2 569 33.4
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 2.3e-70 270.8 532 34.8
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 1.2e-69 268.5 211 75.8
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.2e-68 264.2 533 42.8
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 3.7e-68 263.5 497 38.0
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 3.7e-68 263.5 420 47.9
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 1.8e-67 261.2 512 35.0
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.8e-67 261.2 539 37.8
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 7.0e-67 259.2 564 35.1
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 7.0e-67 259.2 489 40.1
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 7.0e-67 259.2 542 41.0
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 7.0e-67 259.2 543 35.0
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 9.2e-67 258.8 534 41.4
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 1.7e-65 254.6 452 46.0
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 3.9e-65 253.4 239 56.5
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 6.6e-65 252.7 423 44.7
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 8.6e-65 252.3 423 37.1
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 1.9e-64 251.1 534 35.6
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 7.3e-64 249.2 572 33.6
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.6e-63 248.1 615 35.0
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.6e-63 248.1 361 44.6
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 8.9e-62 242.3 427 39.8
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-61 241.9 423 38.8
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 3.7e-60 236.9 565 37.2
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 6.4e-60 236.1 539 34.3
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 6.4e-60 236.1 543 40.9
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 8.3e-60 235.7 482 41.7
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.1e-59 235.3 421 39.9
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.4e-59 235.0 567 36.3
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 1.9e-59 234.6 533 34.7
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 9.2e-59 232.3 402 46.3
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 3.5e-58 230.3 517 38.5
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 4.6e-58 229.9 423 46.1
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 6.6e-57 226.1 534 40.1
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 2.5e-56 224.2 520 35.8
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 3.3e-56 223.8 517 37.3
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 6.2e-55 219.5 536 36.0
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 8.1e-55 219.2 578 35.5
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.3e-54 217.6 286 47.9
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 5.2e-54 216.5 538 33.1
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 8.9e-54 215.7 423 39.2
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.5e-53 214.9 528 34.1
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 6.4e-52 209.5 538 32.9
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.6e-50 204.9 548 35.0
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 2.1e-50 204.5 497 36.0
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 3.5e-50 203.8 427 35.6
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 6.0e-50 203.0 423 39.0
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.3e-49 201.8 488 38.1
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 8.6e-49 199.1 532 32.9
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 8.6e-49 199.1 527 38.0
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 1.5e-48 198.4 427 34.7
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 1.9e-48 198.0 421 39.2
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 9.5e-48 195.7 421 35.4
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.6e-47 194.9 539 31.0
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 8.1e-47 192.6 532 32.1
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 2.3e-46 191.0 427 34.9
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 2.6e-45 187.6 532 31.4
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 6.4e-44 183.0 528 31.8
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 8.4e-44 182.6 421 34.9
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 7.1e-43 179.5 421 34.7
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 8.7e-33 146.0 292 38.7
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 9.6e-32 142.5 107 65.4
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 3.1e-30 137.5 202 45.0
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 5.3e-30 136.7 383 26.9
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.2e-29 135.6 412 31.1
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 6.0e-26 123.2 292 32.5
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 6.0e-26 123.2 80 76.2
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 1.7e-25 121.7 308 33.8
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.3e-25 121.3 134 48.5
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.3e-24 117.1 298 29.2
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 4.2e-19 100.5 99 47.5
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.2e-18 99.0 364 26.4
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.1e-18 98.2 121 61.2
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 3.9e-17 94.0 153 37.9
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 5.1e-17 93.6 96 51.0
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 2.8e-15 87.8 124 47.6
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 3.8e-12 77.4 156 33.3
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 3.5e-10 70.9 62 56.5
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 4.6e-10 70.5 97 40.2
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.0e-09 69.3 84 42.9
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.0e-09 69.3 286 36.0
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 2.4e-06 58.2 104 32.7
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 4.1e-06 57.4 74 40.5
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 9.0e-06 56.2 53 50.9


User provided reference genes

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