Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.5e-228 795.8 392 100.0
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 3.6e-190 668.3 386 84.7
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 5.4e-186 654.4 374 85.8
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 9.1e-186 653.7 364 87.9
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 3.8e-184 648.3 348 89.7
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 5.0e-184 647.9 364 87.1
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.0e-181 640.2 374 84.8
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 4.0e-181 638.3 377 84.6
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 5.2e-181 637.9 364 86.3
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 8.8e-181 637.1 370 85.4
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.3e-179 633.3 394 81.5
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 8.3e-179 630.6 364 85.7
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 2.9e-176 622.1 369 82.7
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 3.8e-176 621.7 373 81.8
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 6.6e-176 620.9 371 82.5
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 3.6e-174 615.1 362 81.5
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 1.4e-173 613.2 356 83.7
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 1.8e-173 612.8 383 78.1
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 6.8e-173 610.9 354 83.9
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.5e-172 609.8 364 81.3
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 5.7e-172 607.8 374 79.4
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 2.9e-171 605.5 370 81.6
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 4.9e-171 604.7 352 83.0
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 1.4e-170 603.2 355 80.8
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 4.1e-170 601.7 368 79.9
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 7.0e-170 600.9 350 83.1
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.2e-169 600.1 375 78.4
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.6e-169 599.7 354 82.2
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.7e-169 599.0 360 81.4
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 3.5e-169 598.6 350 83.1
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 5.9e-169 597.8 351 82.1
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.0e-168 597.0 359 81.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.3e-168 596.7 359 81.3
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 3.0e-168 595.5 359 80.8
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 3.9e-168 595.1 365 78.4
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 3.9e-168 595.1 352 81.5
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 5.0e-168 594.7 350 81.7
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 6.6e-168 594.3 367 78.2
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 6.6e-168 594.3 359 80.5
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 8.6e-168 594.0 366 80.1
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 8.6e-168 594.0 366 78.1
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 3.3e-167 592.0 362 81.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 3.3e-167 592.0 347 81.8
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 7.3e-167 590.9 363 80.4
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 9.5e-167 590.5 351 79.8
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 2.8e-166 589.0 361 79.8
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 3.6e-166 588.6 347 81.3
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 6.2e-166 587.8 364 78.8
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 6.2e-166 587.8 369 78.6
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 6.2e-166 587.8 372 75.8
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.0e-165 587.0 364 78.3
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.1e-165 585.5 355 80.6
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 3.1e-165 585.5 355 80.6
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 5.2e-165 584.7 369 77.0
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 1.2e-164 583.6 356 79.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 2.0e-164 582.8 372 77.4
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 4.4e-164 581.6 355 78.6
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 5.8e-164 581.3 362 76.2
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 7.5e-164 580.9 377 76.4
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.3e-163 580.1 372 76.1
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.7e-163 579.7 372 75.8
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.2e-163 579.3 369 74.5
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 2.2e-163 579.3 360 76.4
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 2.2e-163 579.3 362 76.5
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.2e-163 579.3 372 76.3
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.9e-163 578.9 360 77.8
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 4.9e-163 578.2 350 78.9
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 1.1e-162 577.0 359 75.5
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 3.2e-162 575.5 351 78.3
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.2e-161 573.5 362 76.0
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 1.2e-161 573.5 353 78.2
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.6e-161 573.2 371 74.1
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.6e-161 573.2 355 78.0
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 2.7e-161 572.4 356 77.8
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 3.5e-161 572.0 362 76.0
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 2.5e-159 565.8 402 73.4
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 4.3e-159 565.1 374 74.3
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 4.3e-159 565.1 365 76.2
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.2e-158 563.5 377 74.0
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.2e-158 563.5 377 74.0
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.1e-158 562.8 376 73.4
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 2.1e-158 562.8 376 73.4
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 3.6e-158 562.0 376 73.1
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 3.6e-158 562.0 376 73.1
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.1e-157 560.5 376 72.9
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.8e-157 559.7 370 73.2
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 1.8e-157 559.7 351 77.8
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 7.5e-156 554.3 351 76.6
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 7.5e-156 554.3 376 73.9
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 9.8e-156 553.9 370 72.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 8.3e-155 550.8 363 74.1
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 9.2e-154 547.4 371 74.9
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 2.5e-151 539.3 356 75.0
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 2.8e-150 535.8 355 73.8
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 8.4e-147 524.2 372 68.0
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 4.7e-142 508.4 274 89.1
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.6e-140 502.7 277 86.3
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 9.9e-140 500.7 291 84.2
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 9.9e-132 474.2 359 62.4
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 2.4e-130 469.5 373 60.6
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.6e-129 466.8 275 80.0
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 2.7e-129 466.1 275 79.3
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 3.9e-128 462.2 260 83.8
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 2.4e-125 453.0 359 58.8
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 1.1e-122 444.1 269 77.0
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.4e-122 443.7 267 78.3
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 2.7e-121 439.5 272 77.9
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 6.0e-121 438.3 368 57.3
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.9e-119 433.3 275 74.2
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 1.3e-110 404.1 251 77.3
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.1e-109 399.1 239 84.5
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.2e-100 370.9 275 60.7
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 2.0e-92 343.6 379 46.4
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 4.7e-89 332.4 181 89.0
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 1.0e-80 304.7 384 43.5
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 3.8e-75 286.2 234 64.5
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 5.4e-69 265.8 345 41.2
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.7e-62 243.0 355 40.0
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 4.1e-61 239.6 275 43.3
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 5.0e-51 206.1 122 80.3
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.7e-30 137.9 81 76.5
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 7.8e-28 129.0 88 78.4
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 7.6e-23 112.5 95 66.3
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.4e-21 108.2 74 66.2
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 9.0e-16 89.0 145 38.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 3.2e-13 80.5 88 50.0
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 9.3e-13 79.0 59 69.5
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 8.1e-09 65.9 42 73.8
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.2e-07 62.0 88 44.3


User provided reference genes

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