Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0103500 Salix brachista HOM05D001776 ORTHO05D001771 3.1e-34 147.9 74 100.0
Potri.014G137100 Populus trichocarpa HOM05D001776 ORTHO05D001771 6.8e-34 146.7 74 98.6
Potri.002G212600 Populus trichocarpa HOM05D001776 ORTHO05D001771 1.6e-30 135.6 74 90.5
Sabra19G0059200 Salix brachista HOM05D001776 ORTHO05D001771 2.4e-26 121.7 74 79.7
Sabra08G0000300 Salix brachista HOM05D001776 ORTHO05D001771 4.0e-26 120.9 74 79.7
Sabra08G0014200 Salix brachista HOM05D001776 ORTHO05D001771 5.8e-25 117.1 74 77.0
Sabra08G0000400 Salix brachista HOM05D001776 ORTHO05D001771 9.9e-25 116.3 74 77.0
Manes.05G071600 Manihot esculenta HOM05D001776 ORTHO05D001771 2.2e-24 115.2 74 79.7
QL12p022986 Quercus lobata HOM05D001776 ORTHO05D001771 5.1e-21 104.0 72 69.4
Atru.chr5.1327 Acer truncatum HOM05D001776 ORTHO05D001771 8.7e-21 103.2 67 70.1
Cpa.g.sc9.132 Carica papaya HOM05D001776 ORTHO05D001771 7.3e-20 100.1 71 66.2
Sabra16G0113900 Salix brachista HOM05D002455 ORTHO05D001771 1.3e-19 99.4 61 80.3
Eucgr.H01546 Eucalyptus grandis HOM05D001776 ORTHO05D001771 2.1e-19 98.6 73 61.6
Ciclev10022348m.g Citrus clementina HOM05D001776 ORTHO05D001771 4.8e-19 97.4 66 66.7
THA.LOC104823060 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 4.8e-19 97.4 65 72.3
SHI15283 Sapria himalayana HOM05D001776 ORTHO05D001771 2.4e-18 95.1 61 68.9
THA.LOC104817541 Tarenaya hassleriana HOM05D001776 ORTHO05D001771 3.4e-17 91.3 72 62.5
Thhalv10001805m.g Eutrema salsugineum HOM05D001776 ORTHO05D001771 4.5e-17 90.9 50 86.0
CARHR143430 Cardamine hirsuta HOM05D001776 ORTHO05D001771 5.8e-17 90.5 50 84.0
Haze_04773 Corylus avellana HOM05D001776 ORTHO05D001771 9.9e-17 89.7 66 62.1
Sp4g29940 Schrenkiella parvula HOM05D001776 ORTHO05D001771 9.9e-17 89.7 50 82.0
GSVIVG01011058001 Vitis vinifera HOM05D001776 ORTHO05D001771 1.3e-16 89.4 67 62.7
Dinv32971 Davidia involucrata HOM05D001776 ORTHO05D001771 1.7e-16 89.0 72 59.7
CARHR173320 Cardamine hirsuta HOM05D001776 ORTHO05D001771 2.2e-16 88.6 71 64.8
TWI23G1124 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 2.9e-16 88.2 66 59.1
Aa31LG1G29460 Aethionema arabicum HOM05D001776 ORTHO05D001771 3.8e-16 87.8 60 66.7
FAN15G3065 Fragaria x ananassa HOM05D001776 ORTHO05D001771 3.8e-16 87.8 71 60.6
Lj5g0018222 Lotus japonicus HOM05D001776 ORTHO05D001771 3.8e-16 87.8 71 57.7
Lalb_Chr21g0306631 Lupinus albus HOM05D001776 ORTHO05D001771 3.8e-16 87.8 68 55.9
PGR119G2076 Punica granatum HOM05D001776 ORTHO05D001771 3.8e-16 87.8 73 53.4
FvH4_2g24220 Fragaria vesca HOM05D001776 ORTHO05D001771 4.9e-16 87.4 71 59.2
FAN20G1579 Fragaria x ananassa HOM05D001776 ORTHO05D001771 4.9e-16 87.4 71 59.2
FAN24G0411 Fragaria x ananassa HOM05D001776 ORTHO05D001771 4.9e-16 87.4 71 59.2
FAN27G1113 Fragaria x ananassa HOM05D001776 ORTHO05D001771 4.9e-16 87.4 71 59.2
Aa31LG10G16850 Aethionema arabicum HOM05D001776 ORTHO05D001771 8.4e-16 86.7 70 57.1
AT3G63030 Arabidopsis thaliana HOM05D001776 ORTHO05D001771 8.4e-16 86.7 52 71.2
Glyma.10G023600 Glycine max HOM05D001776 ORTHO05D001771 8.4e-16 86.7 71 60.6
AL5G45820 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 1.1e-15 86.3 50 74.0
Glyma.02G150300 Glycine max HOM05D001776 ORTHO05D001771 1.1e-15 86.3 71 60.6
Prupe.8G248100 Prunus persica HOM05D001776 ORTHO05D001771 1.4e-15 85.9 66 62.1
TWI59G0702 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 1.4e-15 85.9 73 56.2
RcHm_v2.0_Chr6g0292001 Rosa chinensis HOM05D001776 ORTHO05D001771 1.9e-15 85.5 62 59.7
AL7G30840 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 2.4e-15 85.1 66 65.2
AL4G47640 Arabidopsis lyrata HOM05D001776 ORTHO05D001771 3.2e-15 84.7 56 75.0
Phvul.007G168400 Phaseolus vulgaris HOM05D001776 ORTHO05D001771 3.2e-15 84.7 60 63.3
Sp5g00490 Schrenkiella parvula HOM05D001776 ORTHO05D001771 3.2e-15 84.7 53 67.9
AT4G22745 Arabidopsis thaliana HOM05D001776 ORTHO05D001771 4.2e-15 84.3 50 78.0
BcaB02g08079 Brassica carinata HOM05D001776 ORTHO05D001771 4.2e-15 84.3 53 69.8
BcaC02g10336 Brassica carinata HOM05D001776 ORTHO05D001771 5.4e-15 84.0 53 69.8
C04p30190 Brassica napus HOM05D001776 ORTHO05D001771 5.4e-15 84.0 53 69.8
BolC4t24551H Brassica oleracea HOM05D001776 ORTHO05D001771 5.4e-15 84.0 53 69.8
Carub.0005s2967 Capsella rubella HOM05D001776 ORTHO05D001771 5.4e-15 84.0 52 71.2
Cfa006076 Carpinus fangiana HOM05D001776 ORTHO05D001771 5.4e-15 84.0 70 60.0
VMungo0720G2330 Vigna mungo HOM05D001776 ORTHO05D001771 5.4e-15 84.0 69 53.6
A04p00370 Brassica napus HOM05D001776 ORTHO05D001771 7.1e-15 83.6 53 69.8
BraA04t15755Z Brassica rapa HOM05D001776 ORTHO05D001771 7.1e-15 83.6 53 69.8
CSS0007735 Camellia sinensis var. sinensis HOM05D001776 ORTHO05D001771 7.1e-15 83.6 70 54.3
CANSAT25G0213 Cannabis sativa HOM05D001776 ORTHO05D001771 1.2e-14 82.8 71 57.7
Thhalv10006277m.g Eutrema salsugineum HOM05D001776 ORTHO05D001771 1.6e-14 82.4 50 68.0
Aqoxy5G00566 Aquilegia oxysepala HOM05D001776 ORTHO05D001771 4.6e-14 80.9 60 63.3
BcaC07g40786 Brassica carinata HOM05D001776 ORTHO05D001771 4.6e-14 80.9 60 61.7
BcaC07g42713 Brassica carinata HOM05D001776 ORTHO05D001771 4.6e-14 80.9 52 65.4
BcaC07g42716 Brassica carinata HOM05D001776 ORTHO05D001771 4.6e-14 80.9 52 65.4
A09p54870 Brassica napus HOM05D001776 ORTHO05D001771 4.6e-14 80.9 52 65.4
C08p37770 Brassica napus HOM05D001776 ORTHO05D001771 4.6e-14 80.9 60 61.7
BraA09t40897Z Brassica rapa HOM05D001776 ORTHO05D001771 4.6e-14 80.9 52 65.4
CsaV3_7G028470 Cucumis sativus L. HOM05D001776 ORTHO05D001771 4.6e-14 80.9 70 47.1
Hma1.2p1_2318F.1_g319790 Hydrangea macrophylla HOM05D001776 ORTHO05D001771 4.6e-14 80.9 70 52.9
Nn3g21180 Nelumbo nucifera HOM05D001776 ORTHO05D001771 6.0e-14 80.5 62 58.1
MELO3C015875.2 Cucumis melo HOM05D001776 ORTHO05D001771 7.9e-14 80.1 70 48.6
Ca_10394_v3 Cicer arietinum L. HOM05D001776 ORTHO05D001771 1.0e-13 79.7 71 52.1
Ca_10395_v3 Cicer arietinum L. HOM05D001776 ORTHO05D001771 1.0e-13 79.7 71 52.1
ClCG09G006740 Citrullus lanatus HOM05D001776 ORTHO05D001771 1.3e-13 79.3 70 48.6
MD11G1292500 Malus domestica HOM05D001776 ORTHO05D001771 1.3e-13 79.3 70 51.4
Psat6g169800 Pisum sativum HOM05D001776 ORTHO05D001771 1.3e-13 79.3 60 60.0
Sed0027537 Sechium edule HOM05D001776 ORTHO05D001771 2.3e-13 78.6 66 50.0
vmacro02536 Vaccinium macrocarpon HOM05D001776 ORTHO05D001771 2.3e-13 78.6 62 58.1
Cc00_g20200 Coffea canephora HOM05D001776 ORTHO05D001771 3.0e-13 78.2 56 58.9
Medtr1g089750 Medicago truncatula HOM05D001776 ORTHO05D001771 3.0e-13 78.2 71 53.5
MD03G1271900 Malus domestica HOM05D001776 ORTHO05D001771 3.9e-13 77.8 70 54.3
Oeu047486.1 Olea europaea HOM05D001776 ORTHO05D001771 3.9e-13 77.8 67 56.7
Actinidia00721 Actinidia chinensis HOM05D001776 ORTHO05D001771 5.1e-13 77.4 71 50.7
EL10Ac4g08969 Beta vulgaris HOM05D001776 ORTHO05D001771 8.7e-13 76.6 62 51.6
Nitab4.5_0002093g0080 Nicotiana tabacum HOM05D001776 ORTHO05D001771 1.1e-12 76.3 54 55.6
Peaxi162Scf01039g00228 Petunia axillaris HOM05D001776 ORTHO05D001771 1.1e-12 76.3 68 50.0
Sed0009365 Sechium edule HOM05D001776 ORTHO05D001771 1.1e-12 76.3 67 49.3
TPR.G13311 Trifolium pratense HOM05D001776 ORTHO05D001771 1.1e-12 76.3 72 55.6
CAN.G1682.10 Capsicum annuum HOM05D001776 ORTHO05D001771 1.5e-12 75.9 54 57.4
Oeu047903.1 Olea europaea HOM05D001776 ORTHO05D001771 1.5e-12 75.9 68 54.4
Hund05361 Selenicereus undatus HOM05D001776 ORTHO05D001771 1.5e-12 75.9 65 44.6
TAR345G0001 Trochodendron aralioides HOM05D001776 ORTHO05D001771 1.5e-12 75.9 71 49.3
AUR62036027 Chenopodium quinoa HOM05D001776 ORTHO05D001771 1.9e-12 75.5 59 52.5
Nitab4.5_0010603g0010 Nicotiana tabacum HOM05D001776 ORTHO05D001771 1.9e-12 75.5 54 55.6
AUR62033687 Chenopodium quinoa HOM05D001776 ORTHO05D001771 2.5e-12 75.1 65 47.7
Ah.04g163070 Amaranthus hybridus HOM05D001776 ORTHO05D001771 4.3e-12 74.3 72 47.2
EL10Ac7g17190 Beta vulgaris HOM05D001776 ORTHO05D001771 4.3e-12 74.3 56 53.6
Medtr0019s0310 Medicago truncatula HOM05D001776 ORTHO05D001771 4.3e-12 74.3 71 52.1
Sc23g0004940 Simmondsia chinensis HOM05D001776 ORTHO05D001771 4.3e-12 74.3 68 44.1
Sopen06g035790 Solanum pennellii HOM05D001776 ORTHO05D001771 4.3e-12 74.3 65 50.8
AUR62004809 Chenopodium quinoa HOM05D001776 ORTHO05D001771 5.6e-12 73.9 59 50.8
AUR62036028 Chenopodium quinoa HOM05D001776 ORTHO05D001771 5.6e-12 73.9 59 50.8
AUR62036774 Chenopodium quinoa HOM05D001776 ORTHO05D001771 7.4e-12 73.6 65 46.2
PGSC0003DMG402020117 Solanum tuberosum HOM05D001776 ORTHO05D001771 7.4e-12 73.6 66 53.0
Medtr0019s0330 Medicago truncatula HOM05D001776 ORTHO05D001771 9.6e-12 73.2 60 56.7
Medtr6g027240 Medicago truncatula HOM05D001776 ORTHO05D001771 1.3e-11 72.8 71 50.7
Medtr0019s0270 Medicago truncatula HOM05D001776 ORTHO05D001771 1.6e-11 72.4 67 50.7
Solyc06g084400.3 Solanum lycopersicum HOM05D001776 ORTHO05D001771 1.6e-11 72.4 54 57.4
Sc22g0002290 Simmondsia chinensis HOM05D001776 ORTHO05D001771 2.8e-11 71.6 68 45.6
MSTRG.12580 Avicennia marina HOM05D001776 ORTHO05D001771 3.7e-11 71.2 57 54.4
Medtr6g055750 Medicago truncatula HOM05D001776 ORTHO05D001771 4.8e-11 70.9 71 49.3
Carub.0007s1856 Capsella rubella HOM05D001776 ORTHO05D001771 8.1e-11 70.1 49 61.2
TWI15G0757 Tripterygium wilfordii HOM05D001776 ORTHO05D001771 1.4e-10 69.3 53 54.7
unitig_0.g1194 Utricularia gibba HOM05D001776 ORTHO05D001771 1.4e-10 69.3 51 54.9
DCAR_002762 Daucus carota HOM05D001776 ORTHO05D001771 3.1e-10 68.2 71 46.5
Oeu047481.1 Olea europaea HOM05D001776 ORTHO05D001771 3.1e-10 68.2 70 42.9
Medtr6g027250 Medicago truncatula HOM05D001776 ORTHO05D001771 4.0e-10 67.8 51 56.9
Aqoxy2G03185 Aquilegia oxysepala HOM05D001776 ORTHO05D001771 1.2e-09 66.2 73 47.9
MBI19_g46384_MAGBIO Magnolia biondii HOM05D001776 ORTHO05D001771 1.2e-09 66.2 72 45.8
PSO302G0098 Papaver somniferum HOM05D001776 ORTHO05D001771 1.2e-09 66.2 53 52.8
Rhsim13G0021000 Rhododendron simsii HOM05D001776 ORTHO05D001771 2.6e-09 65.1 71 45.1
SGA_v2.0_scaffold36G14375 Striga asiatica HOM05D001776 ORTHO05D001771 2.6e-09 65.1 51 54.9
TAR365G0632 Trochodendron aralioides HOM05D001776 ORTHO05D001771 2.6e-09 65.1 70 47.1
CAN.G1682.9 Capsicum annuum HOM05D001776 ORTHO05D001771 3.4e-09 64.7 60 46.7
Ah.08g212860 Amaranthus hybridus HOM05D001776 ORTHO05D001771 4.5e-09 64.3 67 41.8
PSO170G3539 Papaver somniferum HOM05D001776 ORTHO05D001771 4.5e-09 64.3 58 50.0
Os05g0404600 Oryza sativa ssp. japonica HOM05D001776 ORTHO05D001771 1.0e-08 63.2 72 38.9
CAN.G1682.15 Capsicum annuum HOM05D001776 ORTHO05D001771 2.2e-08 62.0 69 42.0
Zm00001eb349820 Zea mays HOM05D001776 ORTHO05D001771 2.2e-08 62.0 71 38.0
CDE01G0196 Ceratophyllum demersum HOM05D001776 ORTHO05D001771 2.9e-08 61.6 73 39.7
CDE12G0897 Ceratophyllum demersum HOM05D001776 ORTHO05D001771 2.9e-08 61.6 64 42.2
HanXRQChr04g0117971 Helianthus annuus HOM05D001776 ORTHO05D001771 2.9e-08 61.6 59 49.2
Lsat_1_v5_gn_8_55481 Lactuca sativa HOM05D001776 ORTHO05D001771 2.9e-08 61.6 56 46.4
PSO210G7598 Papaver somniferum HOM05D001776 ORTHO05D001771 2.9e-08 61.6 73 42.5
PSO210G1548 Papaver somniferum HOM05D001776 ORTHO05D001771 4.9e-08 60.8 73 41.1
EL10Ac1g02087 Beta vulgaris HOM05D001776 ORTHO05D001771 1.1e-07 59.7 63 46.0
Carub.0007s1818 Capsella rubella HOM05D001776 ORTHO05D001771 4.2e-07 57.8 49 49.0
HPP92_025232 Vanilla planifolia HOM05D001776 ORTHO05D001771 4.2e-07 57.8 70 40.0
PSO302G0182 Papaver somniferum HOM05D001776 ORTHO05D001771 5.5e-07 57.4 54 48.1
ECA236G3662 Erigeron canadensis HOM05D001776 ORTHO05D001771 9.3e-07 56.6 67 40.3
SpUn0005_0170 Schrenkiella parvula HOM05D001776 ORTHO05D001771 9.3e-07 56.6 72 40.3
SpUn0417_0010 Schrenkiella parvula HOM05D001776 ORTHO05D001771 9.3e-07 56.6 72 40.3
Zm00001eb287780 Zea mays HOM05D001776 ORTHO05D001771 2.1e-06 55.5 50 44.0
ATR0626G302 Amborella trichopoda HOM05D001776 ORTHO05D001771 2.7e-06 55.1 49 51.0
Medtr7g013320 Medicago truncatula HOM05D001776 ORTHO05D001771 6.0e-06 53.9 50 52.0


User provided reference genes

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