Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 2.4e-223 779.2 664 100.0
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 3.5e-198 695.7 664 92.9
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 2.0e-116 424.1 669 75.9
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 1.1e-103 381.7 656 74.2
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 6.9e-101 372.5 661 72.6
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 9.9e-100 368.6 655 73.9
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 4.9e-99 366.3 664 71.7
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 4.9e-99 366.3 655 73.7
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 9.3e-98 362.1 673 71.8
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.8e-96 357.8 655 73.3
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 2.3e-96 357.5 665 71.4
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 2.3e-96 357.5 642 73.7
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 2.1e-94 350.9 645 71.9
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 1.1e-93 348.6 620 75.0
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.4e-93 347.4 671 70.5
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 3.4e-92 343.6 649 72.6
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 5.8e-92 342.8 655 71.5
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 2.2e-91 340.9 657 72.3
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 2.9e-91 340.5 656 72.3
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 2.9e-91 340.5 655 72.1
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 2.9e-91 340.5 650 71.2
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 8.4e-91 339.0 559 79.2
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.1e-90 338.6 665 70.7
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 2.5e-90 337.4 670 70.0
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 7.1e-90 335.9 656 70.1
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 9.3e-90 335.5 659 70.6
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 1.2e-89 335.1 682 68.6
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 2.1e-89 334.3 654 70.9
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 7.9e-89 332.4 677 68.5
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.3e-88 331.6 662 69.3
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 2.3e-88 330.9 677 68.2
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 8.7e-88 328.9 658 69.9
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.1e-87 328.6 689 68.4
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 1.9e-87 327.8 660 70.2
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 2.5e-87 327.4 622 73.5
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 3.3e-87 327.0 650 70.9
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 5.7e-87 326.2 658 70.7
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 5.7e-87 326.2 654 70.2
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 1.3e-86 325.1 655 69.9
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.3e-86 325.1 657 70.5
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 1.3e-86 325.1 677 67.5
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 4.8e-86 323.2 690 67.1
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 4.8e-86 323.2 575 75.3
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 6.3e-86 322.8 677 69.1
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 8.2e-86 322.4 652 70.4
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 1.4e-85 321.6 643 69.5
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 1.8e-85 321.2 657 69.3
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.1e-85 320.5 717 51.6
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 4.1e-85 320.1 644 70.7
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 4.1e-85 320.1 653 69.1
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 6.9e-85 319.3 655 69.5
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 9.0e-85 318.9 654 69.7
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 1.2e-84 318.5 677 69.0
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 2.6e-84 317.4 644 71.6
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 5.9e-84 316.2 657 68.9
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 1.7e-83 314.7 654 70.5
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 3.8e-83 313.5 634 70.2
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 5.0e-83 313.2 633 69.7
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 6.5e-83 312.8 662 69.0
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 8.5e-83 312.4 585 66.2
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 4.2e-82 310.1 636 69.5
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 5.5e-82 309.7 636 69.8
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 9.3e-82 308.9 656 68.9
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 1.2e-81 308.5 543 78.3
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 1.2e-81 308.5 686 66.9
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 1.6e-81 308.1 662 68.0
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 1.6e-81 308.1 690 67.1
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 2.7e-81 307.4 636 69.7
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 2.7e-81 307.4 656 68.1
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 3.0e-80 303.9 721 42.9
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 8.7e-80 302.4 661 67.3
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 2.5e-79 300.8 664 68.7
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 9.7e-79 298.9 539 77.4
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 1.3e-78 298.5 646 69.2
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 1.3e-78 298.5 645 69.1
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.8e-78 297.4 534 78.5
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.7e-78 297.0 534 78.1
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 4.8e-78 296.6 646 69.5
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 4.8e-78 296.6 644 69.6
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 4.8e-78 296.6 644 69.6
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 5.3e-77 293.1 648 68.8
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.2e-75 287.7 655 68.2
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 2.9e-75 287.3 668 67.5
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 8.5e-75 285.8 543 75.5
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 9.4e-74 282.3 652 56.4
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 2.7e-73 280.8 562 76.0
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 8.8e-72 275.8 556 38.8
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 1.5e-71 275.0 673 64.8
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.6e-71 274.2 578 73.4
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.0e-67 262.3 513 77.0
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.1e-63 248.8 740 56.1
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.3e-62 245.4 223 61.9
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 2.0e-60 238.0 266 54.1
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 2.2e-59 234.6 282 52.8
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.1e-58 232.3 261 55.9
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 3.6e-57 227.3 656 59.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 4.4e-55 220.3 270 51.1
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 4.4e-47 193.7 157 58.0
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 5.9e-44 183.3 507 72.6
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 5.2e-40 170.2 264 46.6
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.4e-37 162.2 186 64.0
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 5.0e-35 153.7 110 62.7
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 2.6e-31 141.4 226 38.9
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.4e-31 141.0 192 47.9
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 8.3e-30 136.3 129 52.7
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.4e-29 135.6 219 37.4
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 9.2e-29 132.9 110 60.0
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 7.8e-28 129.8 112 63.4
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.3e-27 129.0 199 49.2
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.9e-27 127.5 80 77.5
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.5e-26 124.8 80 76.2
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 1.5e-18 99.0 131 39.7
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 2.1e-17 95.1 120 41.7
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 3.4e-15 87.8 104 49.0
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 2.9e-14 84.7 192 38.0
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 1.1e-13 82.8 118 37.3
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.2e-12 79.3 72 90.3


User provided reference genes

Program Settings