Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0018800 Salix brachista HOM05D006496 ORTHO05D008390 1.1e-175 619.8 296 100.0
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 5.1e-88 328.6 296 61.1
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 2.8e-30 136.7 324 34.3
MD03G1099500 Malus domestica HOM05D006496 ORTHO05D008390 4.8e-30 136.0 298 33.6
QL01p033240 Quercus lobata HOM05D006496 ORTHO05D008390 1.4e-29 134.4 331 30.8
QL01p033291 Quercus lobata HOM05D006496 ORTHO05D008390 1.4e-29 134.4 331 30.8
MD11G1113700 Malus domestica HOM05D006496 ORTHO05D008390 2.4e-29 133.7 309 34.0
CiPaw.13G099300 Carya illinoinensis HOM05D006496 ORTHO05D008390 2.5e-26 123.6 362 27.9
TWI75G0988 Tripterygium wilfordii HOM05D006496 ORTHO05D008390 4.2e-26 122.9 283 32.2
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 9.4e-26 121.7 295 34.2
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 4.7e-25 119.4 175 43.4
Hund04996 Selenicereus undatus HOM05D006496 ORTHO05D008390 4.0e-24 116.3 282 30.9
Ciclev10028859m.g Citrus clementina HOM05D006496 ORTHO05D008390 6.8e-24 115.5 314 30.3
Prupe.6G084200 Prunus persica HOM05D006496 ORTHO05D008390 2.6e-23 113.6 282 33.0
Atru.chr3.3823 Acer truncatum HOM05D006496 ORTHO05D008390 1.3e-22 111.3 179 35.2
FAN11G2800 Fragaria x ananassa HOM05D006496 ORTHO05D008390 4.8e-22 109.4 153 45.1
Actinidia37238 Actinidia chinensis HOM05D006496 ORTHO05D008390 1.8e-21 107.5 269 33.1
Lsat_1_v5_gn_5_167360 Lactuca sativa HOM05D006496 ORTHO05D008390 9.1e-21 105.1 207 34.8
RcHm_v2.0_Chr5g0062921 Rosa chinensis HOM05D006496 ORTHO05D008390 1.2e-20 104.8 188 34.0
AUR62001835 Chenopodium quinoa HOM05D006496 ORTHO05D008390 2.0e-20 104.0 280 28.9
AUR62009623 Chenopodium quinoa HOM05D006496 ORTHO05D008390 2.0e-20 104.0 290 29.0
FAN21G2388 Fragaria x ananassa HOM05D006496 ORTHO05D008390 3.5e-20 103.2 188 37.8
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 4.5e-20 102.8 275 31.6
Rhsim13G0086700 Rhododendron simsii HOM05D006496 ORTHO05D008390 1.0e-19 101.7 216 33.8
CSS0000664 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.3e-19 101.3 280 31.4
FvH4_3g35002 Fragaria vesca HOM05D006496 ORTHO05D008390 5.0e-19 99.4 185 37.3
FAN25G3002 Fragaria x ananassa HOM05D006496 ORTHO05D008390 5.0e-19 99.4 188 36.7
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 6.5e-19 99.0 156 36.5
FAN16G2573 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.5e-18 97.1 188 36.7
FAN11G0827 Fragaria x ananassa HOM05D006496 ORTHO05D008390 5.5e-18 95.9 194 33.5
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 7.2e-18 95.5 287 30.0
Oeu058535.1 Olea europaea HOM05D006496 ORTHO05D008390 3.6e-17 93.2 184 34.8
FvH4_3g35010 Fragaria vesca HOM05D006496 ORTHO05D008390 6.1e-17 92.4 189 33.3
GSVIVG01025031001 Vitis vinifera HOM05D006496 ORTHO05D008390 6.1e-17 92.4 271 27.3
HanXRQChr04g0106921 Helianthus annuus HOM05D006496 ORTHO05D008390 1.4e-16 91.3 146 36.3
Cc01_g12300 Coffea canephora HOM05D006496 ORTHO05D008390 1.8e-16 90.9 305 28.2
Duzib168G2252 Durio zibethinus HOM05D006496 ORTHO05D008390 2.3e-16 90.5 202 31.7
SalBow3G1961 Salvia bowleyana HOM05D006496 ORTHO05D008390 2.3e-16 90.5 281 29.5
Ah.08g218920 Amaranthus hybridus HOM05D006496 ORTHO05D008390 6.8e-16 89.0 292 25.7
SGA_v2.0_scaffold61G21263 Striga asiatica HOM05D006496 ORTHO05D008390 1.2e-15 88.2 133 37.6
Hma1.2p1_0035F.1_g022050 Hydrangea macrophylla HOM05D006496 ORTHO05D008390 2.0e-15 87.4 187 32.1
Lj2A1055T49 Lonicera japonica HOM05D006496 ORTHO05D008390 4.4e-15 86.3 312 26.9
Lalb_Chr22g0349991 Lupinus albus HOM05D006496 ORTHO05D008390 5.7e-15 85.9 147 36.7
Psat5g284120 Pisum sativum HOM05D006496 ORTHO05D008390 5.7e-15 85.9 201 32.3
THA.LOC104810806 Tarenaya hassleriana HOM05D006496 ORTHO05D008390 9.8e-15 85.1 145 35.2
FAN25G1110 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.2e-14 84.0 217 29.0
Lj3g0009171 Lotus japonicus HOM05D006496 ORTHO05D008390 4.9e-14 82.8 168 34.5
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 6.3e-14 82.4 147 32.0
Glyma.13G333300 Glycine max HOM05D006496 ORTHO05D008390 1.1e-13 81.6 222 29.3
HanXRQChr01g0009831 Helianthus annuus HOM05D006496 ORTHO05D008390 1.4e-13 81.3 146 34.9
BcaB08g36218 Brassica carinata HOM05D006496 ORTHO05D008390 1.8e-13 80.9 139 36.0
BcaC04g19631 Brassica carinata HOM05D006496 ORTHO05D008390 1.8e-13 80.9 139 36.7
Sp6g21470 Schrenkiella parvula HOM05D006496 ORTHO05D008390 1.8e-13 80.9 139 36.0
A10p17060 Brassica napus HOM05D006496 ORTHO05D008390 2.4e-13 80.5 139 36.7
C09p52290 Brassica napus HOM05D006496 ORTHO05D008390 2.4e-13 80.5 139 36.0
Thhalv10014093m.g Eutrema salsugineum HOM05D006496 ORTHO05D008390 3.1e-13 80.1 142 35.9
Medtr2g096520 Medicago truncatula HOM05D006496 ORTHO05D008390 3.1e-13 80.1 180 31.7
AL8G36350 Arabidopsis lyrata HOM05D006496 ORTHO05D008390 5.4e-13 79.3 137 35.0
BolC9t58098H Brassica oleracea HOM05D006496 ORTHO05D008390 5.4e-13 79.3 139 37.4
BraA10t43786Z Brassica rapa HOM05D006496 ORTHO05D008390 7.0e-13 79.0 141 36.2
Migut.D02127 Erythranthe guttata HOM05D006496 ORTHO05D008390 7.0e-13 79.0 154 33.8
PGSC0003DMG400015535 Solanum tuberosum HOM05D006496 ORTHO05D008390 7.0e-13 79.0 141 33.3
Psat5g284080 Pisum sativum HOM05D006496 ORTHO05D008390 9.2e-13 78.6 158 32.9
Sopen11g030740 Solanum pennellii HOM05D006496 ORTHO05D008390 9.2e-13 78.6 145 33.1
Carub.0008s2046 Capsella rubella HOM05D006496 ORTHO05D008390 1.6e-12 77.8 138 34.1
Actinidia07064 Actinidia chinensis HOM05D006496 ORTHO05D008390 3.5e-12 76.6 256 30.9
A03p11480 Brassica napus HOM05D006496 ORTHO05D008390 5.9e-12 75.9 139 35.3
BraA03t10462Z Brassica rapa HOM05D006496 ORTHO05D008390 5.9e-12 75.9 139 35.3
FAN16G0777 Fragaria x ananassa HOM05D006496 ORTHO05D008390 5.9e-12 75.9 216 29.2
BolC3t13791H Brassica oleracea HOM05D006496 ORTHO05D008390 7.8e-12 75.5 139 35.3
BcaC01g06549 Brassica carinata HOM05D006496 ORTHO05D008390 1.3e-11 74.7 139 35.3
C03p13280 Brassica napus HOM05D006496 ORTHO05D008390 1.3e-11 74.7 139 35.3
CSS0005064 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 3.8e-11 73.2 112 37.5
COL.COLO4_18451 Corchorus olitorius HOM05D006496 ORTHO05D008390 3.8e-11 73.2 74 47.3
Ca_01342_v3 Cicer arietinum L. HOM05D006496 ORTHO05D008390 5.0e-11 72.8 192 29.2
AT5G59800 Arabidopsis thaliana HOM05D006496 ORTHO05D008390 8.6e-11 72.0 138 32.6
CARHR273380 Cardamine hirsuta HOM05D006496 ORTHO05D008390 8.6e-11 72.0 137 31.4
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 1.1e-10 71.6 132 32.6
TPR.G34315 Trifolium pratense HOM05D006496 ORTHO05D008390 1.5e-10 71.2 369 22.8
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 4.3e-10 69.7 129 30.2
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 4.3e-10 69.7 129 30.2
arahy.Tifrunner.gnm1.ann1.7PT1R0 Arachis hypogaea HOM05D006496 ORTHO05D008390 5.6e-10 69.3 211 27.0
EL10Ac7g15965 Beta vulgaris HOM05D006496 ORTHO05D008390 5.6e-10 69.3 247 24.7
TPR.G34303 Trifolium pratense HOM05D006496 ORTHO05D008390 5.6e-10 69.3 204 25.5
Dinv06143 Davidia involucrata HOM05D021242 ORTHO05D022491 7.3e-10 68.9 88 42.0
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 7.3e-10 68.9 131 31.3
Thecc.09G327500 Theobroma cacao HOM05D006496 ORTHO05D008390 9.5e-10 68.6 60 51.7
DCAR_018892 Daucus carota HOM05D006496 ORTHO05D008390 2.1e-09 67.4 121 33.1
Aa31sc23G160 Aethionema arabicum HOM05D006496 ORTHO05D008390 2.8e-09 67.0 137 33.6
FAN21G0875 Fragaria x ananassa HOM05D006496 ORTHO05D008390 3.6e-09 66.6 229 26.6
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 3.6e-09 66.6 129 29.5
SHI05942 Sapria himalayana HOM05D004190 ORTHO05D004692 4.7e-09 66.2 153 28.8
arahy.Tifrunner.gnm1.ann1.4RYS79 Arachis hypogaea HOM05D006496 ORTHO05D008390 6.1e-09 65.9 212 25.9
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 6.1e-09 65.9 136 31.6
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 6.1e-09 65.9 139 28.8
Nitab4.5_0003498g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 8.0e-09 65.5 127 33.1
Phvul.004G007200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 1.4e-08 64.7 203 27.6
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 2.3e-08 63.9 130 31.5
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 4.0e-08 63.2 130 30.0
Medtr2g096500 Medicago truncatula HOM05D006496 ORTHO05D008485 4.0e-08 63.2 78 44.9
Nitab4.5_0009215g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 4.0e-08 63.2 127 33.1
Medtr4g008590 Medicago truncatula HOM05D006496 ORTHO05D008390 5.2e-08 62.8 62 48.4
Glyma.15G040900 Glycine max HOM05D006496 ORTHO05D008390 6.8e-08 62.4 126 31.7
MSTRG.21184 Avicennia marina HOM05D006496 ORTHO05D008390 8.9e-08 62.0 114 35.1
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 8.9e-08 62.0 130 29.2
FvH4_6g13651 Fragaria vesca HOM05D022761 ORTHO05D022494 8.9e-08 62.0 132 28.0
FAN14G3185 Fragaria x ananassa HOM05D022761 ORTHO05D022494 1.5e-07 61.2 132 28.0
FAN09G4791 Fragaria x ananassa HOM05D004190 ORTHO05D022494 2.6e-07 60.5 132 27.3
Glyma.07G118700 Glycine max HOM05D006496 ORTHO05D008390 3.4e-07 60.1 67 47.8
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 5.7e-07 59.3 128 28.9
Phvul.004G006200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 9.8e-07 58.5 199 29.1
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 1.3e-06 58.2 132 28.8
VMungo1080G1046 Vigna mungo HOM05D006496 ORTHO05D008390 2.9e-06 57.0 205 27.8
QL01p033212 Quercus lobata HOM05D006496 ORTHO05D008390 4.9e-06 56.2 168 29.8


User provided reference genes

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