Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra08G0036400 Salix brachista HOM05D006053 ORTHO05D008381 3.8e-60 234.6 112 100.0
Sabra10G0162000 Salix brachista HOM05D006053 ORTHO05D008381 1.7e-31 139.4 113 64.6
Potri.010G209701 Populus trichocarpa HOM05D006053 ORTHO05D008381 2.8e-31 138.7 113 63.7
Manes.10G035900 Manihot esculenta HOM05D006053 ORTHO05D008381 1.2e-29 133.3 113 61.1
TWI63G0066 Tripterygium wilfordii HOM05D006053 ORTHO05D008381 2.9e-28 128.6 113 60.2
GSVIVG01016604001 Vitis vinifera HOM05D006053 ORTHO05D008381 1.4e-27 126.3 114 58.8
TAR623G1578 Trochodendron aralioides HOM05D006053 ORTHO05D008381 5.5e-27 124.4 113 58.4
Haze_17018 Corylus avellana HOM05D006053 ORTHO05D008381 9.4e-27 123.6 114 58.8
Glyma.20G098800 Glycine max HOM05D006053 ORTHO05D008381 9.4e-27 123.6 113 60.2
Actinidia02973 Actinidia chinensis HOM05D006053 ORTHO05D008381 1.6e-26 122.9 113 57.5
Glyma.10G290400 Glycine max HOM05D006053 ORTHO05D008381 1.6e-26 122.9 113 59.3
CsaV3_5G006870 Cucumis sativus L. HOM05D006053 ORTHO05D008381 2.1e-26 122.5 113 54.0
Cfa001523 Carpinus fangiana HOM05D006053 ORTHO05D008381 2.7e-26 122.1 114 57.9
ClCG07G003140 Citrullus lanatus HOM05D006053 ORTHO05D008381 2.7e-26 122.1 113 53.1
CiPaw.02G181100 Carya illinoinensis HOM05D006053 ORTHO05D008381 4.7e-26 121.3 113 57.5
arahy.Tifrunner.gnm1.ann1.AZ4556 Arachis hypogaea HOM05D006053 ORTHO05D008381 6.1e-26 120.9 113 56.6
Cc02_g08350 Coffea canephora HOM05D006053 ORTHO05D008381 6.1e-26 120.9 113 56.6
MELO3C023836.2 Cucumis melo HOM05D006053 ORTHO05D008381 6.1e-26 120.9 113 54.0
arahy.Tifrunner.gnm1.ann1.JRYV00 Arachis hypogaea HOM05D006053 ORTHO05D008381 8.0e-26 120.6 113 56.6
Lalb_Chr06g0164221 Lupinus albus HOM05D006053 ORTHO05D008381 8.0e-26 120.6 113 57.5
QL08p058728 Quercus lobata HOM05D006053 ORTHO05D008381 1.0e-25 120.2 113 58.4
Sed0000212 Sechium edule HOM05D006053 ORTHO05D008381 1.0e-25 120.2 113 54.9
Sc20g0002520 Simmondsia chinensis HOM05D006053 ORTHO05D008381 1.0e-25 120.2 113 54.9
Eucgr.G02908 Eucalyptus grandis HOM05D006053 ORTHO05D008381 1.8e-25 119.4 113 56.6
Nn2g10473 Nelumbo nucifera HOM05D006053 ORTHO05D008381 3.9e-25 118.2 113 55.8
PGSC0003DMG400031213 Solanum tuberosum HOM05D006053 ORTHO05D008381 3.9e-25 118.2 113 52.2
Nitab4.5_0001277g0050 Nicotiana tabacum HOM05D006053 ORTHO05D008381 5.2e-25 117.9 113 52.2
VMungo0720G3082 Vigna mungo HOM05D006053 ORTHO05D008381 5.2e-25 117.9 113 55.8
AUR62022513 Chenopodium quinoa HOM05D006053 ORTHO05D008381 6.7e-25 117.5 113 54.9
Dinv25975 Davidia involucrata HOM05D006053 ORTHO05D008381 8.8e-25 117.1 113 54.9
Phvul.007G011000 Phaseolus vulgaris HOM05D006053 ORTHO05D008381 8.8e-25 117.1 108 57.4
RcHm_v2.0_Chr1g0365851 Rosa chinensis HOM05D006053 ORTHO05D008381 8.8e-25 117.1 117 56.4
Solyc06g018110.3 Solanum lycopersicum HOM05D006053 ORTHO05D008381 8.8e-25 117.1 113 52.2
Sopen06g008460 Solanum pennellii HOM05D006053 ORTHO05D008381 8.8e-25 117.1 113 52.2
ECA232G2518 Erigeron canadensis HOM05D006053 ORTHO05D008381 1.1e-24 116.7 113 54.0
Nitab4.5_0000120g0180 Nicotiana tabacum HOM05D006053 ORTHO05D008381 1.5e-24 116.3 113 51.3
MSTRG.23542 Avicennia marina HOM05D006053 ORTHO05D008381 2.0e-24 115.9 113 50.4
Rhsim03G0127000 Rhododendron simsii HOM05D006053 ORTHO05D008381 2.6e-24 115.5 113 54.9
Lsat_1_v5_gn_9_66300 Lactuca sativa HOM05D006053 ORTHO05D008381 3.3e-24 115.2 109 56.0
PGR142G2322 Punica granatum HOM05D006053 ORTHO05D008381 3.3e-24 115.2 118 54.2
unitig_699.g19587 Utricularia gibba HOM05D006053 ORTHO05D008381 4.4e-24 114.8 113 50.4
Aqoxy2G02006 Aquilegia oxysepala HOM05D006053 ORTHO05D008381 5.7e-24 114.4 108 56.5
HanXRQChr09g0247701 Helianthus annuus HOM05D006053 ORTHO05D008381 7.4e-24 114.0 109 56.0
Ah.16g107460 Amaranthus hybridus HOM05D006053 ORTHO05D008381 9.7e-24 113.6 113 54.0
AUR62038385 Chenopodium quinoa HOM05D006053 ORTHO05D008381 1.3e-23 113.2 113 53.1
AUR62038388 Chenopodium quinoa HOM05D006053 ORTHO05D008381 1.3e-23 113.2 113 53.1
Peaxi162Scf00408g00034 Petunia axillaris HOM05D006053 ORTHO05D008381 1.3e-23 113.2 114 51.8
MD01G1122100 Malus domestica HOM05D006053 ORTHO05D008381 1.7e-23 112.8 116 53.4
Zm00001eb266400 Zea mays HOM05D006053 ORTHO05D008381 1.7e-23 112.8 109 55.0
RhsimUnG0003300 Rhododendron simsii HOM05D006053 ORTHO05D008381 2.2e-23 112.5 112 54.5
Hma1.2p1_0192F.1_g083600 Hydrangea macrophylla HOM05D006053 ORTHO05D008381 2.8e-23 112.1 113 50.4
MD07G1191600 Malus domestica HOM05D006053 ORTHO05D008381 2.8e-23 112.1 116 53.4
MBI05_g35605_MAGBIO Magnolia biondii HOM05D006053 ORTHO05D008381 3.7e-23 111.7 114 52.6
SHI22531 Sapria himalayana HOM05D006053 ORTHO05D008381 3.7e-23 111.7 115 52.2
Hund20006 Selenicereus undatus HOM05D006053 ORTHO05D008381 3.7e-23 111.7 115 53.0
EL10As19g24197 Beta vulgaris HOM05D006053 ORTHO05D008381 4.8e-23 111.3 113 54.0
Ciclev10031409m.g Citrus clementina HOM05D006053 ORTHO05D008381 4.8e-23 111.3 113 52.2
Migut.L00294 Erythranthe guttata HOM05D006053 ORTHO05D008381 4.8e-23 111.3 114 50.0
Gorai.011G253900 Gossypium raimondii HOM05D006053 ORTHO05D008381 4.8e-23 111.3 113 53.1
Gohir.A10G214200 Gossypium hirsutum HOM05D006053 ORTHO05D008381 6.3e-23 110.9 113 53.1
Gohir.D10G223000 Gossypium hirsutum HOM05D006053 ORTHO05D008381 6.3e-23 110.9 113 53.1
Prupe.2G229700 Prunus persica HOM05D006053 ORTHO05D008381 6.3e-23 110.9 113 54.0
HPP92_006599 Vanilla planifolia HOM05D006053 ORTHO05D008381 6.3e-23 110.9 113 53.1
COL.COLO4_14945 Corchorus olitorius HOM05D006053 ORTHO05D008381 8.2e-23 110.5 114 54.4
FAN06G4406 Fragaria x ananassa HOM05D006053 ORTHO05D008381 1.1e-22 110.2 121 52.9
Duzib114G0287 Durio zibethinus HOM05D006053 ORTHO05D008381 1.8e-22 109.4 113 51.3
Atru.chr12.522 Acer truncatum HOM05D006053 ORTHO05D008381 2.4e-22 109.0 114 53.5
FAN03G0601 Fragaria x ananassa HOM05D006053 ORTHO05D008381 2.4e-22 109.0 117 53.0
FAN10G2741 Fragaria x ananassa HOM05D006053 ORTHO05D008381 2.4e-22 109.0 117 53.0
Lj8C88T8 Lonicera japonica HOM05D006053 ORTHO05D008381 2.4e-22 109.0 113 49.6
PSO339G3195 Papaver somniferum HOM05D006053 ORTHO05D008381 2.4e-22 109.0 117 51.3
PSO384G4800 Papaver somniferum HOM05D006053 ORTHO05D008381 2.4e-22 109.0 117 51.3
DCAR_015208 Daucus carota HOM05D006053 ORTHO05D008381 3.1e-22 108.6 113 52.2
SGA_v2.0_scaffold115G32148 Striga asiatica HOM05D006053 ORTHO05D008381 3.1e-22 108.6 114 50.9
FvH4_7g21531 Fragaria vesca HOM05D006053 ORTHO05D008381 4.1e-22 108.2 121 52.1
FAN06G2982 Fragaria x ananassa HOM05D006053 ORTHO05D008381 4.1e-22 108.2 121 52.1
Psat6g236560 Pisum sativum HOM05D006053 ORTHO05D008381 9.1e-22 107.1 113 53.1
ATR0113G011 Amborella trichopoda HOM05D006053 ORTHO05D008381 1.6e-21 106.3 113 51.3
Prupe.2G229600 Prunus persica HOM05D006053 ORTHO05D008381 2.0e-21 105.9 129 48.1
FAN01G1874 Fragaria x ananassa HOM05D006053 ORTHO05D008381 3.5e-21 105.1 117 51.3
TPR.G14004 Trifolium pratense HOM05D006053 ORTHO05D008381 3.5e-21 105.1 113 51.3
Thecc.10G048700 Theobroma cacao HOM05D006053 ORTHO05D008381 1.0e-20 103.6 114 50.9
SEGI_38671 Sequoiadendron giganteum HOM05D006053 ORTHO05D008381 3.8e-20 101.7 116 48.3
Medtr1g115375 Medicago truncatula HOM05D006053 ORTHO05D008381 8.5e-20 100.5 113 50.4
Lj5g0015550 Lotus japonicus HOM05D006053 ORTHO05D008381 3.6e-18 95.1 108 50.9
THA.LOC104824082 Tarenaya hassleriana HOM05D006053 ORTHO05D008381 3.6e-18 95.1 113 45.1
Cpa.g.sc1.353 Carica papaya HOM05D006053 ORTHO05D008381 6.1e-18 94.4 113 45.1
Carub.0005s2199 Capsella rubella HOM05D006053 ORTHO05D008381 1.8e-17 92.8 119 44.5
CARHR165350 Cardamine hirsuta HOM05D006053 ORTHO05D008381 2.3e-17 92.4 118 44.1
AT3G55340 Arabidopsis thaliana HOM05D006053 ORTHO05D008381 4.0e-17 91.7 118 44.9
AL5G36480 Arabidopsis lyrata HOM05D006053 ORTHO05D008381 6.7e-17 90.9 119 43.7
BcaB01g00113 Brassica carinata HOM05D006053 ORTHO05D008381 8.8e-17 90.5 118 43.2
Sp5g07130 Schrenkiella parvula HOM05D006053 ORTHO05D008381 8.8e-17 90.5 118 44.1
Aa31LG10G10350 Aethionema arabicum HOM05D006053 ORTHO05D008381 1.2e-16 90.1 117 43.6
C08p30500 Brassica napus HOM05D006053 ORTHO05D008381 1.5e-16 89.7 118 43.2
BolC8t50669H Brassica oleracea HOM05D006053 ORTHO05D008381 1.5e-16 89.7 118 43.2
A09p48230 Brassica napus HOM05D006053 ORTHO05D008381 2.0e-16 89.4 118 43.2
BraA09t40276Z Brassica rapa HOM05D006053 ORTHO05D008381 2.0e-16 89.4 118 43.2
Oeu056126.3 Olea europaea HOM05D006053 ORTHO05D008381 2.6e-16 89.0 92 48.9
FAN03G0613 Fragaria x ananassa HOM05D006053 ORTHO05D008381 3.3e-16 88.6 64 68.8
AagrBONN_evm.TU.Sc2ySwM_368.1156 Anthoceros agrestis HOM05D006053 ORTHO05D008381 4.5e-13 78.2 116 37.9
Mapoly0121s0015 Marchantia polymorpha HOM05D006053 ORTHO05D008381 3.8e-12 75.1 113 37.2
Pp3c14_1940 Physcomitrium patens HOM05D006053 ORTHO05D008381 1.9e-11 72.8 116 39.7
CDE09G1153 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 5.5e-11 71.2 82 45.1
CSS0026153 Camellia sinensis var. sinensis HOM05D006053 ORTHO05D008381 9.4e-11 70.5 101 43.6
CDE02G2651 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 2.3e-09 65.9 56 57.1
CDE04G3245 Ceratophyllum demersum HOM05D006053 ORTHO05D008381 3.0e-09 65.5 116 36.2
BcaB02g08428 Brassica carinata HOM05D006053 ORTHO05D008381 5.2e-09 64.7 108 38.9
SMO118G0265 Selaginella moellendorffii HOM05D006053 ORTHO05D008381 1.4e-06 56.6 72 41.7
Zm00001eb001700 Zea mays HOM05D006053 ORTHO05D008381 1.8e-06 56.2 118 32.2


User provided reference genes

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