Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 0.0e+00 1093.6 526 100.0
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 5.3e-306 1053.5 531 95.3
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 7.0e-274 946.8 531 85.3
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 9.8e-268 926.4 538 81.6
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 2.2e-267 925.2 542 81.4
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 3.7e-267 924.5 538 82.5
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 4.9e-267 924.1 536 83.4
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 7.0e-266 920.2 536 82.6
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 7.0e-266 920.2 538 82.2
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 7.8e-265 916.8 534 81.8
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.5e-263 912.5 533 82.0
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.5e-263 911.8 543 80.3
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 3.3e-263 911.4 533 82.2
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 4.3e-263 911.0 541 80.6
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 4.3e-263 911.0 533 82.2
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 9.5e-263 909.8 551 79.7
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 3.6e-262 907.9 533 81.2
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 3.6e-262 907.9 538 80.9
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 8.0e-262 906.7 533 81.8
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.8e-261 905.6 590 74.9
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 2.3e-261 905.2 531 81.7
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 5.2e-261 904.0 540 80.9
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 8.9e-261 903.3 534 80.9
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.9e-261 903.3 569 76.8
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.0e-260 902.1 541 79.9
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 2.6e-260 901.7 538 80.9
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.6e-260 901.7 556 78.1
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 9.8e-260 899.8 533 80.9
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 1.3e-259 899.4 541 80.2
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.7e-259 899.0 540 80.7
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 4.9e-259 897.5 547 79.0
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.1e-258 896.3 523 81.1
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.4e-258 896.0 533 81.1
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 1.4e-258 896.0 535 80.0
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.9e-258 895.6 526 81.4
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 5.4e-258 894.0 533 80.5
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 5.4e-258 894.0 526 80.8
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 9.2e-258 893.3 532 80.3
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 1.2e-257 892.9 535 80.2
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.6e-257 891.0 531 80.0
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 6.0e-257 890.6 532 79.9
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 8.6e-256 886.7 536 79.9
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.1e-255 886.3 531 79.3
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 2.5e-255 885.2 564 77.0
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 3.3e-255 884.8 534 79.2
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 4.3e-255 884.4 526 79.5
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 7.3e-255 883.6 534 79.2
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.2e-254 882.9 535 78.9
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 2.1e-254 882.1 587 73.9
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 2.8e-254 881.7 536 78.0
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 2.8e-254 881.7 534 79.0
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 4.7e-254 880.9 535 78.1
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 6.2e-254 880.6 534 78.8
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.4e-253 879.4 535 77.9
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 2.3e-253 878.6 540 78.1
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.3e-251 872.8 523 79.3
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 4.9e-251 870.9 531 78.9
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 4.9e-251 870.9 534 79.2
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 1.4e-250 869.4 545 77.4
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 2.4e-250 868.6 539 78.5
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 3.2e-250 868.2 537 77.8
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.6e-249 865.9 540 77.6
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 1.6e-249 865.9 536 76.9
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.1e-249 865.5 518 79.2
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 2.1e-249 865.5 517 79.7
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 8.6e-248 860.1 543 76.4
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 8.6e-248 860.1 524 77.7
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.9e-247 859.0 545 75.8
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 1.9e-247 859.0 526 78.1
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 2.5e-247 858.6 534 76.6
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.5e-247 858.6 536 76.7
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 2.5e-247 858.6 533 78.2
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 1.2e-246 856.3 544 76.7
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 2.8e-246 855.1 536 76.5
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.1e-245 853.2 542 76.6
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.5e-244 849.4 541 77.6
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 1.3e-243 846.3 536 77.2
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 2.2e-243 845.5 531 76.8
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 4.9e-243 844.3 488 81.8
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 3.5e-241 838.2 536 75.2
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 4.6e-241 837.8 536 75.0
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 7.8e-241 837.0 536 75.0
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 7.8e-241 837.0 539 77.0
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.0e-240 836.6 531 75.7
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 8.6e-240 833.6 533 74.9
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 8.6e-240 833.6 533 74.9
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 1.9e-239 832.4 531 75.7
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 1.6e-238 829.3 544 74.6
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 3.6e-238 828.2 523 77.1
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 8.1e-238 827.0 533 74.1
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 5.8e-236 820.8 470 81.5
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 2.9e-235 818.5 539 73.3
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.4e-234 816.2 533 73.4
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 2.4e-234 815.5 540 74.3
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.6e-233 812.8 542 74.0
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 8.7e-232 807.0 559 71.7
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.9e-231 805.8 483 78.7
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 7.3e-231 803.9 542 70.7
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.3e-230 803.1 559 71.6
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-227 792.7 561 69.3
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 3.8e-227 791.6 535 73.5
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 8.7e-224 780.4 532 71.6
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 4.9e-219 764.6 536 70.0
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 2.1e-214 749.2 477 74.2
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.9e-207 726.1 516 68.2
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 2.5e-207 725.7 535 66.4
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 7.6e-204 714.1 415 79.3
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.3e-203 713.4 398 81.9
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 2.9e-203 712.2 448 75.4
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.3e-200 703.4 429 79.5
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 6.7e-192 674.5 407 81.8
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 7.4e-183 644.4 518 63.9
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 5.5e-178 628.2 398 73.1
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.2e-171 606.3 331 83.1
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 2.2e-150 536.6 477 56.2
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.4e-150 535.0 408 68.1
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 9.2e-149 531.2 343 74.6
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.3e-147 527.3 468 55.1
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 9.5e-146 521.2 283 84.8
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.6e-132 477.2 344 66.9
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.9e-130 470.3 451 53.7
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.3e-130 468.4 365 62.2
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 6.0e-124 448.7 451 51.0
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 6.2e-121 438.7 328 69.5
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 9.0e-112 408.3 269 75.1
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.8e-96 357.5 230 78.7
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 1.6e-92 344.4 181 86.7
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 1.2e-84 318.2 182 80.2
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.0e-75 287.0 167 79.0
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.7e-55 219.2 134 71.6
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 2.5e-45 187.6 115 78.3
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.4e-43 181.8 102 80.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 8.9e-35 152.5 81 88.9
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 5.8e-26 123.2 65 86.2
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 6.2e-20 103.2 56 82.1
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 6.8e-19 99.8 57 78.9
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 4.4e-18 97.1 67 65.7
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 4.4e-18 97.1 67 65.7
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 4.9e-17 93.6 50 80.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 5.1e-14 83.6 78 53.8


User provided reference genes

Program Settings