Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 3.7e-288 994.2 505 100.0
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 2.3e-226 788.9 464 81.9
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 4.8e-147 525.4 465 59.6
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 1.3e-120 437.6 551 44.8
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 5.6e-119 432.2 510 47.5
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 2.0e-116 423.7 518 46.3
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 7.5e-116 421.8 494 47.2
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 1.3e-115 421.0 540 43.9
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 1.0e-112 411.4 482 47.3
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 7.3e-111 405.2 462 49.1
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 1.6e-110 404.1 460 49.1
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 4.7e-110 402.5 456 48.0
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 2.3e-109 400.2 446 48.7
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.1e-109 399.8 456 46.9
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 4.0e-109 399.4 448 48.0
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 5.2e-109 399.1 456 47.4
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 5.8e-108 395.6 532 43.4
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 1.7e-107 394.0 482 47.1
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 1.7e-107 394.0 452 46.7
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 3.5e-105 386.3 488 44.3
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 4.3e-103 379.4 472 47.2
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 9.5e-103 378.3 497 45.3
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.4e-101 374.4 490 43.9
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 1.8e-101 374.0 458 45.4
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 6.8e-101 372.1 374 51.3
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 2.0e-100 370.5 495 42.6
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 2.6e-100 370.2 481 43.7
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 1.1e-98 364.8 522 41.2
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.9e-98 364.0 450 45.6
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 1.2e-97 361.3 470 44.3
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 1.6e-97 360.9 477 44.4
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.7e-97 360.1 463 44.9
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 2.7e-97 360.1 490 42.7
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 3.5e-97 359.8 449 45.9
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 6.0e-97 359.0 449 45.7
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 1.0e-96 358.2 479 44.1
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 1.7e-96 357.5 451 44.1
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 2.3e-96 357.1 459 45.1
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 6.6e-96 355.5 449 45.4
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.1e-95 354.8 468 44.7
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.3e-95 353.2 499 40.5
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 5.6e-95 352.4 460 43.9
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 4.7e-94 349.4 461 43.4
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 8.1e-94 348.6 457 45.3
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 2.4e-93 347.1 452 44.0
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 3.1e-93 346.7 304 55.6
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 3.1e-93 346.7 441 45.6
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 8.9e-93 345.1 503 41.2
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 1.5e-92 344.4 463 43.6
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 1.5e-92 344.4 479 43.0
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 3.4e-92 343.2 479 43.4
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 4.4e-92 342.8 448 44.4
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 9.9e-92 341.7 445 45.4
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.1e-90 338.2 364 50.3
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 1.4e-90 337.8 446 43.3
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 1.9e-90 337.4 382 47.1
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 7.1e-90 335.5 471 41.2
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 7.1e-90 335.5 468 41.7
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 1.6e-89 334.3 498 40.6
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 3.9e-88 329.7 452 45.1
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 6.6e-88 328.9 380 47.4
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 8.7e-88 328.6 448 42.4
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 1.1e-87 328.2 368 47.3
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 4.3e-87 326.2 456 41.2
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 4.3e-87 326.2 446 43.9
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 1.3e-86 324.7 461 42.3
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 2.8e-86 323.6 372 47.8
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 8.1e-86 322.0 474 42.2
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 2.4e-85 320.5 387 45.5
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 3.1e-85 320.1 455 42.4
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 9.0e-85 318.5 368 47.3
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 3.4e-84 316.6 379 45.9
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 7.6e-84 315.5 459 41.6
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 1.4e-82 311.2 375 45.6
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 4.2e-82 309.7 504 37.7
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 7.1e-82 308.9 458 40.8
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 4.6e-81 306.2 443 43.3
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 1.0e-80 305.1 448 42.0
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 5.1e-80 302.8 458 41.0
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 8.7e-80 302.0 459 40.1
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 8.7e-80 302.0 457 40.7
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 1.1e-79 301.6 378 43.9
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 2.5e-79 300.4 449 39.6
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 5.6e-79 299.3 462 41.1
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 5.6e-79 299.3 521 38.0
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 7.4e-79 298.9 377 43.8
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 1.3e-78 298.1 462 41.1
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 3.6e-78 296.6 457 38.9
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 8.1e-78 295.4 462 40.7
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 4.0e-77 293.1 507 37.5
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 4.0e-77 293.1 451 39.9
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 4.0e-77 293.1 514 37.7
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 9.0e-77 292.0 449 39.4
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 2.6e-76 290.4 472 37.7
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 9.9e-76 288.5 293 50.5
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.8e-75 286.6 505 37.4
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 8.4e-75 285.4 436 40.1
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 3.5e-73 280.0 449 39.6
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 3.9e-72 276.6 450 38.4
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 4.3e-71 273.1 382 42.7
Ca_08398_v3 Cicer arietinum L. HOM05D004448 ORTHO05D005919 1.1e-69 268.5 294 49.7
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 3.2e-66 256.9 462 35.3
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 5.5e-66 256.1 318 47.2
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 2.7e-65 253.8 302 47.0
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 7.4e-63 245.7 385 39.7
HPP92_006937 Vanilla planifolia HOM05D004448 ORTHO05D005919 3.1e-61 240.4 295 43.7
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 4.1e-61 240.0 297 44.1
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 1.2e-60 238.4 418 38.0
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 2.2e-59 234.2 538 32.5
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 2.5e-55 220.7 479 32.2
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.2e-52 211.8 309 43.4
ATR0705G152 Amborella trichopoda HOM05D004448 ORTHO05D005919 2.6e-52 210.7 309 42.1
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.7e-51 208.0 322 38.2
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 5.0e-51 206.5 356 35.1
MD02G1076000 Malus domestica HOM05D004448 ORTHO05D005919 9.4e-50 202.2 150 66.0
Rhsim03G0233900 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.0e-48 198.7 292 42.1
Gorai.N024000 Gossypium raimondii HOM05D004448 ORTHO05D005919 8.8e-48 195.7 301 41.5
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.1e-47 195.3 335 35.8
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 3.3e-47 193.7 341 36.1
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 3.3e-47 193.7 316 38.0
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 9.7e-47 192.2 485 29.9
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 4.1e-45 186.8 342 36.5
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 5.9e-44 183.0 237 44.3
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 2.7e-41 174.1 320 37.5
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 7.4e-39 166.0 229 41.5
TPR.G35500 Trifolium pratense HOM05D004448 ORTHO05D005919 9.7e-39 165.6 154 53.9
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.4e-37 161.8 157 51.0
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.8e-37 161.4 552 27.7
Lalb_Chr24g0393831 Lupinus albus HOM05D004448 ORTHO05D005919 4.1e-37 160.2 153 54.9
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 1.9e-34 151.4 312 32.7
SGA_v2.0_scaffold62G21589 Striga asiatica HOM05D004448 ORTHO05D005919 2.5e-34 151.0 148 52.0
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.6e-33 148.3 387 30.2
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 3.6e-33 147.1 299 35.5
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 1.0e-32 145.6 208 38.9
AT5G56770 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 1.4e-29 135.2 183 45.9
TPR.G35590 Trifolium pratense HOM05D004448 ORTHO05D005919 1.4e-29 135.2 103 61.2
Gohir.D08G265900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 2.4e-29 134.4 301 33.9
AL8G32610 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 3.5e-28 130.6 166 42.2
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 7.7e-28 129.4 484 26.4
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.9e-27 127.5 287 29.6
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.9e-27 127.5 287 29.6
Atru.chr7.1555 Acer truncatum HOM05D004448 ORTHO05D005919 1.5e-26 125.2 102 57.8
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 1.5e-26 125.2 487 26.3
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 1.5e-23 115.2 481 24.7
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 1.5e-23 115.2 220 34.5
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 1.4e-21 108.6 276 31.2
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.1e-21 107.5 243 30.9
SalBow1G6253 Salvia bowleyana HOM05D004448 ORTHO05D005919 3.1e-21 107.5 128 43.8
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.7e-20 104.4 118 49.2
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 7.7e-20 102.8 225 32.4
Carub.0008s1725 Capsella rubella HOM05D004448 ORTHO05D005919 6.5e-19 99.8 187 35.3
Medtr6g092500 Medicago truncatula HOM05D004448 ORTHO05D005919 8.6e-19 99.4 112 46.4
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 7.5e-15 86.3 179 31.8
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 2.8e-14 84.3 91 50.5
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 1.8e-13 81.6 487 21.4
CBR_g20264 Chara braunii HOM05D000505 ORTHO05D000301 2.7e-12 77.8 147 34.0
Medtr6g092480 Medicago truncatula HOM05D012533 ORTHO05D264910 2.7e-12 77.8 62 58.1
Pp3c9_23170 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.0e-11 75.9 220 30.5
Glyma.01G003300 Glycine max HOM05D004448 ORTHO05D005919 1.1e-10 72.4 72 51.4
FvH4_1g07231 Fragaria vesca HOM05D004448 ORTHO05D005919 1.0e-08 65.9 146 28.8
A01p17460 Brassica napus HOM05D004448 ORTHO05D015948 5.2e-08 63.5 214 24.3
BcaNung02444 Brassica carinata HOM05D004448 ORTHO05D015948 6.8e-08 63.2 98 33.7
FAN28G0616 Fragaria x ananassa HOM05D001205 ORTHO05D001087 7.5e-07 59.7 124 33.9
BcaC09g50676 Brassica carinata HOM05D004448 ORTHO05D015948 3.7e-06 57.4 60 40.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 3.7e-06 57.4 60 40.0


User provided reference genes

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