Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 5.0e-134 481.1 241 100.0
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 2.6e-130 468.8 239 97.9
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 9.2e-104 380.6 227 80.2
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 3.9e-102 375.2 238 77.7
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 2.5e-101 372.5 243 76.1
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 5.6e-101 371.3 242 75.6
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 9.5e-101 370.5 233 77.7
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 3.6e-100 368.6 240 73.3
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 8.0e-100 367.5 238 75.6
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 5.2e-99 364.8 243 74.5
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.8e-99 364.4 233 76.4
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.2e-98 363.6 236 73.7
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.5e-98 363.2 241 72.6
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.5e-98 363.2 241 72.6
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 1.5e-98 363.2 234 75.6
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 2.0e-98 362.8 233 74.7
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.4e-98 362.1 233 76.0
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 4.4e-98 361.7 238 73.5
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 5.8e-98 361.3 238 73.9
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 9.8e-98 360.5 241 74.3
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.3e-97 360.1 234 74.8
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.3e-97 360.1 239 74.9
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.3e-97 360.1 238 73.1
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 1.7e-97 359.8 238 73.9
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.7e-97 359.8 219 79.5
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 2.2e-97 359.4 233 75.5
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 2.2e-97 359.4 239 72.0
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.2e-97 359.4 234 74.4
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 4.9e-97 358.2 243 72.0
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 6.4e-97 357.8 234 75.6
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 6.4e-97 357.8 242 72.7
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 6.4e-97 357.8 232 74.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 1.1e-96 357.1 232 75.4
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 1.4e-96 356.7 230 73.0
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 5.4e-96 354.8 239 72.4
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 5.4e-96 354.8 234 74.8
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 7.0e-96 354.4 237 72.2
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.6e-95 353.2 232 75.0
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 2.0e-95 352.8 236 74.2
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 6.0e-95 351.3 220 73.2
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.0e-94 350.5 218 77.1
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 1.3e-94 350.1 234 69.7
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 3.0e-94 349.0 234 72.6
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 3.9e-94 348.6 239 72.0
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 3.9e-94 348.6 237 72.2
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 5.0e-94 348.2 230 73.0
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.1e-93 347.1 239 71.1
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.1e-93 347.1 220 75.5
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.5e-93 346.7 220 74.5
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.5e-93 346.7 233 74.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.5e-93 346.7 239 68.2
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 1.5e-93 346.7 220 75.5
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.5e-93 345.9 232 73.3
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 3.3e-93 345.5 232 72.8
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 4.3e-93 345.1 232 72.4
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 5.6e-93 344.7 220 76.8
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 5.6e-93 344.7 227 73.6
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 9.5e-93 344.0 221 76.9
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 9.5e-93 344.0 235 73.6
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 9.5e-93 344.0 234 71.4
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.2e-92 343.6 239 69.5
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.2e-92 343.6 236 71.6
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.6e-92 343.2 239 69.5
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.6e-92 343.2 243 69.5
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.8e-92 342.4 220 74.5
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 2.8e-92 342.4 234 73.1
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 2.8e-92 342.4 234 73.1
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 4.7e-92 341.7 236 69.1
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 4.7e-92 341.7 233 72.5
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 6.2e-92 341.3 221 76.9
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 6.2e-92 341.3 235 71.5
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 8.1e-92 340.9 270 64.1
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 8.1e-92 340.9 219 74.0
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 8.1e-92 340.9 235 71.1
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 8.1e-92 340.9 241 68.9
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.1e-91 340.5 230 70.9
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.8e-91 339.7 260 65.4
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 5.2e-91 338.2 230 71.3
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.3e-89 333.6 233 72.5
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 4.9e-89 331.6 240 65.8
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 6.0e-87 324.7 242 67.4
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 3.0e-86 322.4 220 69.1
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 3.3e-85 318.9 246 65.9
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 6.4e-81 304.7 241 65.6
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.4e-81 304.3 242 62.4
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.4e-81 304.3 242 62.4
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 3.2e-80 302.4 237 62.4
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 7.1e-80 301.2 236 61.4
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.6e-76 290.0 231 62.3
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 1.4e-75 287.0 242 59.9
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 6.8e-75 284.6 238 60.1
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 3.4e-74 282.3 235 58.3
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 2.4e-72 276.2 192 69.8
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 3.9e-70 268.9 189 72.5
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 6.6e-70 268.1 171 74.3
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 9.6e-69 264.2 166 72.3
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 8.1e-68 261.2 185 69.2
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.1e-67 260.8 172 68.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 7.6e-66 254.6 175 67.4
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 1.7e-65 253.4 165 70.9
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 2.9e-65 252.7 215 61.9
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 4.9e-65 251.9 164 71.3
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 9.3e-64 247.7 166 67.5
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 5.6e-61 238.4 231 54.5
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 9.3e-56 221.1 182 59.3
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 2.3e-54 216.5 127 80.3
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 6.5e-49 198.4 300 40.3
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 1.0e-46 191.0 289 39.8
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 6.7e-38 161.8 136 63.2
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.5e-34 150.6 94 73.4
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 1.4e-27 127.5 90 68.9
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.3e-22 110.2 73 67.1
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 5.7e-21 105.5 222 33.3
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 7.0e-19 98.6 57 84.2
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 3.6e-15 86.3 241 30.7
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 4.0e-14 82.8 51 72.5
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.4e-11 73.6 155 30.3
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 6.8e-06 55.5 115 40.0


User provided reference genes

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