Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 1.7e-238 828.9 414 100.0
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 1.4e-229 799.3 414 96.4
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 1.2e-199 699.9 394 84.0
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.7e-198 696.0 391 84.4
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 6.4e-198 694.1 394 83.0
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 4.2e-197 691.4 395 85.1
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 4.6e-196 688.0 392 83.4
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 7.9e-196 687.2 394 82.5
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 1.3e-195 686.4 391 83.6
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.8e-195 686.0 399 82.2
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 8.7e-195 683.7 387 83.7
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 1.6e-193 679.5 395 82.5
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 8.1e-193 677.2 391 81.6
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.8e-192 676.0 390 83.6
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 3.1e-192 675.2 392 82.4
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 9.0e-192 673.7 395 81.0
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 9.0e-192 673.7 395 81.0
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.5e-191 672.9 392 83.2
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 2.0e-191 672.5 416 79.8
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 3.4e-191 671.8 395 80.8
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 7.6e-191 670.6 394 81.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 1.7e-190 669.5 414 78.7
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 8.4e-190 667.2 394 81.2
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 2.5e-189 665.6 389 82.5
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 4.2e-189 664.8 392 80.9
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 9.3e-189 663.7 394 79.4
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 9.3e-189 663.7 392 81.1
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 1.6e-188 662.9 384 81.8
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 3.5e-188 661.8 392 80.1
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 6.0e-188 661.0 413 75.8
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 1.8e-187 659.4 390 80.8
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.8e-187 659.4 391 79.8
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 2.3e-187 659.1 394 79.9
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 5.1e-187 657.9 392 80.4
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 2.5e-186 655.6 391 79.0
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 2.5e-186 655.6 391 79.0
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 2.5e-186 655.6 391 77.7
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 2.5e-186 655.6 394 78.2
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 3.3e-186 655.2 391 80.1
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.3e-186 654.8 391 79.8
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 5.7e-186 654.4 392 78.3
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 5.7e-186 654.4 391 79.5
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 9.6e-186 653.7 390 79.2
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.3e-185 653.3 395 77.7
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.3e-185 653.3 391 79.3
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 1.6e-185 652.9 392 79.8
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.8e-185 652.1 413 75.1
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 3.7e-185 651.7 390 80.0
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 6.3e-185 651.0 393 76.6
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 8.2e-185 650.6 391 79.5
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.4e-184 649.8 387 79.3
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.4e-184 649.8 394 79.2
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 1.4e-184 649.8 394 77.9
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.4e-184 649.8 394 77.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.8e-184 649.4 393 78.9
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 2.4e-184 649.0 392 79.3
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 9.0e-184 647.1 393 78.9
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 9.0e-184 647.1 394 77.7
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 1.5e-183 646.4 394 78.4
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 2.0e-183 646.0 394 78.4
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 2.0e-183 646.0 394 78.4
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 2.0e-183 646.0 413 74.8
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 2.6e-183 645.6 393 78.6
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 2.6e-183 645.6 393 78.6
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 3.4e-183 645.2 393 78.9
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 7.6e-183 644.0 414 74.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 7.6e-183 644.0 398 76.4
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.3e-182 643.3 394 78.9
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 6.5e-182 641.0 407 76.2
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.9e-181 639.4 392 76.5
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 3.2e-181 638.6 392 76.5
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 5.5e-181 637.9 386 79.3
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 1.6e-180 636.3 398 76.9
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.5e-180 635.2 390 77.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 4.6e-180 634.8 394 77.4
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 1.0e-179 633.6 386 77.2
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 1.1e-178 630.2 390 77.7
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.3e-178 628.6 411 74.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 1.3e-177 626.7 390 77.2
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 3.7e-177 625.2 388 77.1
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 6.3e-177 624.4 392 75.3
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.4e-176 623.2 393 76.8
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.0e-175 619.4 389 76.3
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 4.2e-173 611.7 410 72.4
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 9.1e-168 594.0 411 70.8
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 8.5e-166 587.4 356 78.4
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.1e-165 587.0 351 79.2
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.4e-165 586.6 353 80.2
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 9.4e-165 583.9 390 70.3
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 4.8e-161 571.6 367 76.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 7.0e-160 567.8 356 78.7
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 6.5e-158 561.2 352 77.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 3.2e-157 558.9 376 73.9
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.2e-156 557.0 316 81.6
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 7.5e-154 547.7 316 80.7
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 4.1e-152 542.0 326 79.1
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 5.5e-149 531.6 309 79.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 7.2e-149 531.2 325 79.4
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 9.4e-149 530.8 316 78.5
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 5.2e-147 525.0 391 62.1
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.7e-145 520.0 319 76.5
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 6.3e-145 518.1 383 61.1
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.0e-142 510.8 314 74.2
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 3.0e-139 499.2 276 85.9
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 1.5e-138 496.9 390 58.5
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 9.8e-138 494.2 393 59.3
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 2.8e-137 492.7 387 65.6
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 9.5e-125 451.1 292 75.3
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.6e-124 450.3 267 78.3
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.7e-105 387.1 406 47.5
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 4.3e-101 372.5 274 60.9
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.2e-95 354.4 271 65.3
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 4.6e-95 352.4 405 44.0
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 6.0e-95 352.1 231 71.9
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 1.4e-88 330.9 245 69.4
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 2.9e-81 306.6 200 73.5
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 3.5e-79 299.7 384 41.1
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 3.3e-69 266.5 359 39.8
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.8e-67 260.8 434 34.8
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.9e-56 224.2 314 42.7
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 2.4e-27 127.5 81 67.9
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 9.1e-27 125.6 85 69.4
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 6.3e-20 102.8 76 69.7
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 1.6e-18 98.2 75 65.3
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 4.7e-15 86.7 44 79.5
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 7.5e-13 79.3 140 33.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.7e-12 78.2 108 47.2
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 2.3e-09 67.8 49 69.4
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 5.0e-09 66.6 58 65.5


User provided reference genes

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