Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 0.0e+00 1681.0 944 100.0
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 6.0e-159 565.8 831 43.2
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 1.3e-158 564.7 837 42.9
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 5.1e-158 562.8 867 44.2
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 6.7e-158 562.4 860 41.9
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 4.3e-157 559.7 870 42.1
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 1.3e-156 558.1 853 41.3
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 1.6e-156 557.8 865 42.2
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 2.8e-156 557.0 852 42.7
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 4.8e-156 556.2 848 42.3
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 8.1e-156 555.4 838 43.4
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.8e-155 554.3 855 41.4
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 4.0e-155 553.1 848 42.9
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 5.3e-155 552.7 867 42.9
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 6.9e-155 552.4 836 41.1
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 1.2e-154 551.6 852 42.3
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 1.5e-154 551.2 868 42.3
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 2.6e-154 550.4 852 41.4
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 2.6e-154 550.4 857 42.4
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 3.4e-154 550.1 852 42.0
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 7.6e-154 548.9 842 40.7
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 1.0e-153 548.5 853 41.4
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 2.2e-153 547.4 826 42.0
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 2.9e-153 547.0 842 41.3
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 2.5e-152 543.9 858 41.7
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 2.5e-152 543.9 842 41.4
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 2.5e-152 543.9 836 42.1
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 2.5e-152 543.9 850 41.1
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 7.1e-152 542.3 828 42.3
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 9.3e-152 542.0 848 41.2
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 1.6e-151 541.2 832 41.9
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 2.7e-151 540.4 833 41.5
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 2.7e-151 540.4 857 41.9
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 3.5e-151 540.0 836 42.0
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 6.0e-151 539.3 853 41.6
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 6.0e-151 539.3 834 42.1
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 1.0e-150 538.5 858 40.7
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.8e-150 537.7 855 41.5
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 2.3e-150 537.3 843 40.7
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 2.3e-150 537.3 853 41.0
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 5.1e-150 536.2 852 40.8
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 1.5e-149 534.6 863 41.1
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.9e-149 534.3 851 42.2
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 3.3e-149 533.5 869 41.2
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 4.3e-149 533.1 861 40.7
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 5.7e-149 532.7 850 41.5
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.6e-148 531.2 882 39.6
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 2.1e-148 530.8 828 41.7
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 2.8e-148 530.4 859 39.6
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 1.1e-147 528.5 842 40.3
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.1e-147 528.5 837 40.4
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 1.8e-147 527.7 850 41.2
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.8e-147 527.7 855 40.8
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 2.4e-147 527.3 839 40.4
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 4.1e-147 526.6 845 39.8
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 6.9e-147 525.8 833 42.3
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 9.0e-147 525.4 838 40.9
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 1.2e-146 525.0 816 41.8
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 2.0e-146 524.2 837 41.0
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 3.4e-146 523.5 831 40.7
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 1.0e-145 521.9 856 39.4
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 1.7e-145 521.2 845 40.8
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 1.7e-145 521.2 860 39.5
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 3.8e-145 520.0 843 39.7
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 5.0e-145 519.6 822 40.0
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 1.4e-144 518.1 881 39.4
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 3.6e-143 513.5 824 40.8
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 5.1e-142 509.6 832 39.7
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 1.9e-141 507.7 865 39.1
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 3.7e-140 503.4 824 39.7
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 4.8e-140 503.1 849 41.2
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 1.8e-139 501.1 849 40.6
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 3.1e-139 500.4 847 39.4
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 3.1e-139 500.4 854 38.5
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 5.3e-139 499.6 852 39.6
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 5.3e-139 499.6 832 40.9
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 6.9e-139 499.2 853 40.9
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 6.9e-139 499.2 844 39.3
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 1.2e-138 498.4 853 40.9
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 3.4e-138 496.9 832 39.4
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 1.1e-136 491.9 821 39.5
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 1.1e-136 491.9 772 40.8
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 1.4e-136 491.5 847 39.8
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 1.4e-136 491.5 847 39.8
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 1.4e-136 491.5 918 37.9
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 3.2e-136 490.3 853 39.5
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 7.2e-136 489.2 736 41.4
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 6.1e-135 486.1 847 39.8
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 6.1e-135 486.1 780 40.6
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 7.9e-135 485.7 864 37.8
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 8.8e-134 482.3 839 39.2
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 1.1e-133 481.9 846 39.0
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 4.4e-133 479.9 852 39.0
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 1.4e-131 474.9 848 38.8
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 2.6e-130 470.7 981 36.3
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 5.9e-130 469.5 857 38.2
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 1.3e-129 468.4 839 37.4
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 1.7e-129 468.0 872 37.8
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 5.0e-129 466.5 826 39.7
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 6.1e-119 433.0 774 37.7
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.3e-116 425.2 771 38.5
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 2.2e-116 424.5 754 37.8
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 7.0e-91 339.7 461 42.1
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 2.7e-82 311.2 1033 30.2
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 2.2e-76 291.6 532 38.7
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 8.1e-71 273.1 510 37.6
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 2.4e-70 271.6 677 34.7
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 6.9e-62 243.4 361 40.4
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 6.9e-62 243.4 723 30.2
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 9.9e-61 239.6 437 37.8
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 4.8e-55 220.7 241 46.9
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 2.6e-37 161.8 283 38.2
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 3.0e-25 121.7 784 25.8
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 3.9e-25 121.3 109 51.4
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 8.2e-23 113.6 105 47.6
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.1e-18 99.0 183 37.2
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 3.3e-16 91.7 287 33.4
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 1.8e-14 85.9 105 46.7
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 4.1e-14 84.7 160 36.9
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.3e-12 79.7 70 50.0
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 2.0e-08 65.9 135 33.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.6e-08 65.5 96 34.4
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 4.4e-08 64.7 89 34.8
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 9.7e-08 63.5 89 41.6
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 2.2e-07 62.4 89 34.8
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 4.8e-07 61.2 89 36.0
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 6.3e-07 60.8 61 47.5
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 6.3e-07 60.8 89 37.1
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 8.2e-07 60.5 89 34.8
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.4e-06 59.7 91 35.2
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 2.4e-06 58.9 95 32.6
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 3.1e-06 58.5 61 39.3
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 4.1e-06 58.2 90 34.4
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 5.3e-06 57.8 64 40.6
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 5.3e-06 57.8 64 39.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 7.0e-06 57.4 64 40.6
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 9.1e-06 57.0 64 39.1
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 9.1e-06 57.0 61 44.3
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 9.1e-06 57.0 64 40.6
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 9.1e-06 57.0 94 33.0
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 9.1e-06 57.0 64 39.1


User provided reference genes

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