Gene: TPR.G2793

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G2793
Transcript Identifier TPR.T2871
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG1 : 9568283-9576896 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000251
#Genes/#Species 1696/100
Phylogenetic origin

ID ORTHO05D007889
#Genes/#Species 125/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA2871.v2
id Tp57577_TGAC_v2_gene2793.v2
pacid 35980133
uniprot A0A2K3NAX0

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009734	ISO	PLAZA Integrative Orthology	auxin-activated signaling pathway	AT5G23080
GO:0015914	ISO	PLAZA Homology (enrichment)	phospholipid transport	HOM05D000251
GO:0009926	ISO	PLAZA Integrative Orthology	auxin polar transport	AT5G23080
GO:0030422	IEA	GOA Database	production of siRNA involved in RNA interference
GO:0010087	IEA	GOA Database	phloem or xylem histogenesis
GO:0035196	IEA	GOA Database	production of miRNAs involved in gene silencing by miRNA
GO:0006397	IEA	GOA Database	mRNA processing
GO:0006397	IEA	InterPro	mRNA processing
GO:0006396	IEA	InterPro	RNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016887	ISO	PLAZA Homology (enrichment)	ATP hydrolysis activity	HOM05D000251
GO:0005215	ISO	PLAZA Homology (enrichment)	transporter activity	HOM05D000251
GO:0140326	ISO	PLAZA Homology (enrichment)	ATPase-coupled intramembrane lipid transporter activity	HOM05D000251
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G23080
GO:0005524	ISO	PLAZA Homology (enrichment)	ATP binding	HOM05D000251
GO:0000166	ISO	PLAZA Homology (enrichment)	nucleotide binding	HOM05D000251
GO:0000287	ISO	PLAZA Homology (enrichment)	magnesium ion binding	HOM05D000251
GO:0003723	IEA	InterPro	RNA binding
GO:0070878	IEA	GOA Database	primary miRNA binding
GO:0070883	IEA	GOA Database	pre-miRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016021	ISO	PLAZA Homology (enrichment)	integral component of membrane	HOM05D000251
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035967	SWAP/Surp superfamily
IPR000061	SWAP/Surp
IPR011666	G patch domain-containing protein, N-terminal

Mapman id	Description
16.9.2.1.4	RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component TOUGH