Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0296 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 8.1e-211 736.9 389 100.0
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 9.3e-98 361.3 288 73.3
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.1e-69 268.1 286 62.6
SMO235G0003 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 3.4e-39 166.8 142 66.2
SMO290G0017 Selaginella moellendorffii HOM05D001672 ORTHO05D006785 1.1e-29 135.2 121 68.6
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 7.0e-29 132.5 286 32.5
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 3.5e-28 130.2 100 67.0
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 1.0e-27 128.6 312 31.1
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 1.9e-26 124.4 323 31.0
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 1.9e-26 124.4 287 33.1
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 2.5e-26 124.0 293 29.4
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 4.3e-26 123.2 317 30.0
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 4.7e-25 119.8 346 29.5
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 1.4e-24 118.2 380 30.3
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 1.4e-24 118.2 319 32.0
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 1.8e-24 117.9 309 32.7
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 1.8e-24 117.9 367 27.5
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 2.3e-24 117.5 306 30.1
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 2.3e-24 117.5 318 32.1
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 3.1e-24 117.1 338 28.7
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 4.0e-24 116.7 380 29.2
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 5.2e-24 116.3 338 29.0
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 8.9e-24 115.5 362 26.8
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 1.2e-23 115.2 362 27.3
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.2e-23 115.2 317 30.9
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 2.0e-23 114.4 325 30.2
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 5.8e-23 112.8 294 29.3
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 7.5e-23 112.5 293 31.7
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 9.8e-23 112.1 317 30.6
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 1.3e-22 111.7 348 26.4
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.3e-22 111.7 370 29.2
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 3.7e-22 110.2 309 29.1
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 6.4e-22 109.4 316 30.4
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 6.4e-22 109.4 315 32.1
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 8.3e-22 109.0 359 28.4
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 1.4e-21 108.2 362 27.3
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 2.4e-21 107.5 320 29.1
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 3.2e-21 107.1 344 27.3
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 4.1e-21 106.7 337 27.3
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 4.1e-21 106.7 344 27.9
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 9.2e-21 105.5 343 27.4
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 9.2e-21 105.5 332 28.6
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 1.6e-20 104.8 324 29.3
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 1.6e-20 104.8 350 32.9
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 1.6e-20 104.8 347 28.0
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 2.0e-20 104.4 315 29.8
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 2.0e-20 104.4 362 26.2
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 2.0e-20 104.4 339 27.7
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 2.7e-20 104.0 330 28.5
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 6.0e-20 102.8 347 27.7
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.0e-19 102.1 349 25.5
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 1.0e-19 102.1 346 27.5
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 1.0e-19 102.1 350 28.9
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.3e-19 101.7 342 28.7
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 1.3e-19 101.7 355 26.8
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 1.7e-19 101.3 355 27.3
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 2.3e-19 100.9 375 26.4
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 2.3e-19 100.9 346 26.9
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 3.0e-19 100.5 354 28.0
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 3.0e-19 100.5 349 28.1
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 5.0e-19 99.8 341 28.2
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 5.0e-19 99.8 348 25.6
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 5.0e-19 99.8 349 27.5
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 6.6e-19 99.4 403 25.3
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 8.6e-19 99.0 316 28.5
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 8.6e-19 99.0 356 25.3
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 8.6e-19 99.0 344 28.8
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 8.6e-19 99.0 354 26.8
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 1.5e-18 98.2 378 25.4
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 1.5e-18 98.2 377 27.1
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 1.5e-18 98.2 345 26.1
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 1.5e-18 98.2 354 26.8
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 2.5e-18 97.4 366 27.0
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 3.3e-18 97.1 344 28.5
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 5.6e-18 96.3 352 27.8
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 9.5e-18 95.5 365 25.5
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 2.1e-17 94.4 345 32.2
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 3.6e-17 93.6 100 46.0
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 4.7e-17 93.2 361 25.8
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 6.2e-17 92.8 346 28.3
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 8.1e-17 92.4 361 26.6
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 1.1e-16 92.0 348 30.2
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 1.8e-16 91.3 350 25.1
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 4.0e-16 90.1 377 24.1
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 6.8e-16 89.4 377 23.6
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 6.8e-16 89.4 361 26.3
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 1.2e-15 88.6 355 26.2
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 1.2e-15 88.6 377 24.1
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 2.0e-15 87.8 363 25.1
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 2.6e-15 87.4 358 25.7
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 3.4e-15 87.0 346 27.5
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 1.3e-14 85.1 97 45.4
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 1.7e-14 84.7 351 25.4
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 2.2e-14 84.3 97 43.3
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 4.9e-14 83.2 181 36.5
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 1.4e-13 81.6 99 41.4
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 4.1e-13 80.1 103 40.8
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 2.1e-12 77.8 324 25.3
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 1.7e-11 74.7 413 23.2
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 8.9e-08 62.4 300 23.3
SEGI_27797 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 8.9e-08 62.4 36 72.2
SMO356G0043 Selaginella moellendorffii HOM05D001672 ORTHO05D008029 1.5e-07 61.6 157 37.6
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 9.9e-07 58.9 120 33.3
CARHR244450 Cardamine hirsuta HOM05D005767 ORTHO05D006785 6.4e-06 56.2 34 67.6


User provided reference genes

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