Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO338G0037 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 5.7e-183 644.0 307 100.0
SMO351G0460 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 3.8e-147 525.0 257 96.5
SMO140G0092 Selaginella moellendorffii HOM05D005545 ORTHO05D006917 1.1e-117 427.2 256 82.4
Actinidia10163 Actinidia chinensis HOM05D005545 ORTHO05D006917 1.1e-98 364.0 304 58.2
Atru.chr12.1348 Acer truncatum HOM05D005545 ORTHO05D006917 9.6e-98 360.9 302 57.6
Gohir.A05G400900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 9.6e-98 360.9 303 58.4
Thecc.10G162000 Theobroma cacao HOM05D005545 ORTHO05D006917 9.6e-98 360.9 303 58.4
Cfa010879 Carpinus fangiana HOM05D005545 ORTHO05D006917 2.8e-97 359.4 287 59.6
arahy.Tifrunner.gnm1.ann1.HR7PRR Arachis hypogaea HOM05D005545 ORTHO05D006917 4.8e-97 358.6 300 57.7
Gorai.012G017400 Gossypium raimondii HOM05D005545 ORTHO05D006917 4.8e-97 358.6 303 58.4
HanXRQChr11g0341811 Helianthus annuus HOM05D005545 ORTHO05D006917 6.2e-97 358.2 292 58.2
ClCG05G026770 Citrullus lanatus HOM05D005545 ORTHO05D006917 8.1e-97 357.8 290 59.3
Sed0011144 Sechium edule HOM05D005545 ORTHO05D006917 8.1e-97 357.8 289 59.9
TAR636G1823 Trochodendron aralioides HOM05D005545 ORTHO05D006917 8.1e-97 357.8 304 57.6
Prupe.2G034500 Prunus persica HOM05D005545 ORTHO05D006917 1.1e-96 357.5 303 57.1
CSS0017863 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.8e-96 356.7 297 58.2
CSS0046105 Camellia sinensis var. sinensis HOM05D005545 ORTHO05D006917 1.8e-96 356.7 297 58.2
COL.COLO4_21694 Corchorus olitorius HOM05D005545 ORTHO05D006917 1.8e-96 356.7 303 56.8
ECA248G0597 Erigeron canadensis HOM05D005545 ORTHO05D006917 2.4e-96 356.3 291 58.1
Lsat_1_v5_gn_1_115460 Lactuca sativa HOM05D005545 ORTHO05D006917 3.1e-96 355.9 290 58.6
FAN03G2070 Fragaria x ananassa HOM05D005545 ORTHO05D006917 4.0e-96 355.5 313 56.2
FvH4_7g02950 Fragaria vesca HOM05D005545 ORTHO05D006917 5.3e-96 355.1 303 56.4
SGA_v2.0_scaffold124G33619 Striga asiatica HOM05D005545 ORTHO05D006917 6.9e-96 354.8 284 59.9
Duzib114G0439 Durio zibethinus HOM05D005545 ORTHO05D006917 9.0e-96 354.4 303 57.4
arahy.Tifrunner.gnm1.ann1.598UNF Arachis hypogaea HOM05D005545 ORTHO05D006917 1.5e-95 353.6 300 57.0
CsaV3_5G036710 Cucumis sativus L. HOM05D005545 ORTHO05D006917 1.5e-95 353.6 290 58.6
Os01g0952200 Oryza sativa ssp. japonica HOM05D005545 ORTHO05D006917 1.5e-95 353.6 291 58.1
MD02G1288500 Malus domestica HOM05D005545 ORTHO05D006917 2.0e-95 353.2 301 57.1
CiPaw.13G013000 Carya illinoinensis HOM05D005545 ORTHO05D006917 2.6e-95 352.8 294 57.5
Dinv32030 Davidia involucrata HOM05D005545 ORTHO05D006917 3.4e-95 352.4 304 56.9
Nn7g36650 Nelumbo nucifera HOM05D005545 ORTHO05D006917 3.4e-95 352.4 303 57.1
Peaxi162Scf00025g01520 Petunia axillaris HOM05D005545 ORTHO05D006917 3.4e-95 352.4 303 56.1
MELO3C012467.2 Cucumis melo HOM05D005545 ORTHO05D006917 5.8e-95 351.7 290 58.6
Nn2g14866 Nelumbo nucifera HOM05D005545 ORTHO05D006917 5.8e-95 351.7 304 57.6
Ciclev10004162m.g Citrus clementina HOM05D005545 ORTHO05D006917 9.9e-95 350.9 303 55.8
SGA_v2.0_scaffold319G48544 Striga asiatica HOM05D005545 ORTHO05D006917 9.9e-95 350.9 300 57.7
MD07G1038300 Malus domestica HOM05D005545 ORTHO05D006917 1.3e-94 350.5 301 56.8
Solyc11g005250.3 Solanum lycopersicum HOM05D005545 ORTHO05D006917 1.3e-94 350.5 302 55.6
Migut.B01225 Erythranthe guttata HOM05D005545 ORTHO05D006917 1.7e-94 350.1 297 56.9
Lj9A655T39 Lonicera japonica HOM05D005545 ORTHO05D006917 2.2e-94 349.7 295 58.6
PGR044G1070 Punica granatum HOM05D005545 ORTHO05D006917 2.2e-94 349.7 291 57.7
TWI63G0062 Tripterygium wilfordii HOM05D005545 ORTHO05D006917 2.9e-94 349.4 303 57.8
GSVIVG01013494001 Vitis vinifera HOM05D005545 ORTHO05D006917 2.9e-94 349.4 303 55.8
Nitab4.5_0003414g0020 Nicotiana tabacum HOM05D005545 ORTHO05D006917 3.8e-94 349.0 299 55.9
vmacro13750 Vaccinium macrocarpon HOM05D005545 ORTHO05D006917 3.8e-94 349.0 331 52.0
MSTRG.20517 Avicennia marina HOM05D005545 ORTHO05D006917 4.9e-94 348.6 302 56.6
CAN.G1074.9 Capsicum annuum HOM05D005545 ORTHO05D006917 4.9e-94 348.6 303 55.1
Oeu040901.1 Olea europaea HOM05D005545 ORTHO05D006917 6.4e-94 348.2 303 55.4
SalBow5G5421 Salvia bowleyana HOM05D005545 ORTHO05D006917 6.4e-94 348.2 302 57.3
Sopen11g001260 Solanum pennellii HOM05D005545 ORTHO05D006917 6.4e-94 348.2 302 55.3
Aqoxy2G00348 Aquilegia oxysepala HOM05D005545 ORTHO05D006917 1.1e-93 347.4 304 55.6
Manes.04G160000 Manihot esculenta HOM05D005545 ORTHO05D006917 1.1e-93 347.4 319 53.9
Eucgr.J01185 Eucalyptus grandis HOM05D005545 ORTHO05D006917 1.9e-93 346.7 301 56.5
Glyma.11G154800 Glycine max HOM05D005545 ORTHO05D006917 1.9e-93 346.7 296 56.1
QL04p014793 Quercus lobata HOM05D005545 ORTHO05D006917 1.9e-93 346.7 303 56.1
QL04p018188 Quercus lobata HOM05D005545 ORTHO05D006917 1.9e-93 346.7 303 56.1
PSO384G2575 Papaver somniferum HOM05D005545 ORTHO05D006917 3.2e-93 345.9 302 55.6
Gohir.D04G014900 Gossypium hirsutum HOM05D005545 ORTHO05D006917 4.2e-93 345.5 303 57.4
Thhalv10010067m.g Eutrema salsugineum HOM05D005545 ORTHO05D006917 5.4e-93 345.1 298 56.4
Potri.003G197701 Populus trichocarpa HOM05D005545 ORTHO05D006917 5.4e-93 345.1 286 57.7
Potri.T125006 Populus trichocarpa HOM05D005545 ORTHO05D006917 5.4e-93 345.1 286 57.7
unitig_749.g13482 Utricularia gibba HOM05D005545 ORTHO05D006917 7.1e-93 344.7 290 57.2
CDE12G0276 Ceratophyllum demersum HOM05D005545 ORTHO05D006917 9.3e-93 344.4 303 55.1
CANSAT56G1029 Cannabis sativa HOM05D005545 ORTHO05D006917 1.2e-92 344.0 303 55.4
A04p05370 Brassica napus HOM05D005545 ORTHO05D006917 2.1e-92 343.2 291 57.0
VMungo1080G1426 Vigna mungo HOM05D005545 ORTHO05D006917 2.1e-92 343.2 298 55.7
AagrBONN_evm.TU.Sc2ySwM_368.3444 Anthoceros agrestis HOM05D005545 ORTHO05D006917 2.7e-92 342.8 288 56.6
BraA04t16237Z Brassica rapa HOM05D005545 ORTHO05D006917 2.7e-92 342.8 291 57.0
THA.LOC104824192 Tarenaya hassleriana HOM05D005545 ORTHO05D006917 4.6e-92 342.0 285 57.2
AagrBONN_evm.TU.Sc2ySwM_117.768 Anthoceros agrestis HOM05D005545 ORTHO05D006917 7.9e-92 341.3 288 56.6
Lalb_Chr04g0264091 Lupinus albus HOM05D005545 ORTHO05D006917 1.3e-91 340.5 298 56.7
BolC4t25380H Brassica oleracea HOM05D005545 ORTHO05D006917 2.3e-91 339.7 296 55.7
BcaB02g08489 Brassica carinata HOM05D005545 ORTHO05D006917 3.0e-91 339.3 296 55.1
Phvul.005G027400 Phaseolus vulgaris HOM05D005545 ORTHO05D006917 3.0e-91 339.3 294 55.4
BcaC02g09068 Brassica carinata HOM05D005545 ORTHO05D006917 5.1e-91 338.6 296 55.7
C04p38060 Brassica napus HOM05D005545 ORTHO05D006917 5.1e-91 338.6 296 55.7
Lj3g0017403 Lotus japonicus HOM05D005545 ORTHO05D006917 6.6e-91 338.2 300 55.0
AL5G35510 Arabidopsis lyrata HOM05D005545 ORTHO05D006917 1.1e-90 337.4 298 55.0
Ah.12g062880 Amaranthus hybridus HOM05D005545 ORTHO05D006917 1.5e-90 337.0 293 56.0
Sp5g07960 Schrenkiella parvula HOM05D005545 ORTHO05D006917 1.5e-90 337.0 284 57.0
FAN06G4324 Fragaria x ananassa HOM05D005545 ORTHO05D006917 1.9e-90 336.7 320 52.8
Glyma.04G138300 Glycine max HOM05D005545 ORTHO05D006917 1.9e-90 336.7 296 55.1
Psat5g217720 Pisum sativum HOM05D005545 ORTHO05D006917 2.5e-90 336.3 300 55.3
Ca_19084_v3 Cicer arietinum L. HOM05D005545 ORTHO05D006917 4.3e-90 335.5 300 54.3
EL10Ac2g02815 Beta vulgaris HOM05D005545 ORTHO05D006917 5.6e-90 335.1 294 56.5
HPP92_001017 Vanilla planifolia HOM05D005545 ORTHO05D006917 1.3e-89 334.0 300 54.3
Aa31sc35G110 Aethionema arabicum HOM05D005545 ORTHO05D006917 6.2e-89 331.6 295 56.3
CARHR164360 Cardamine hirsuta HOM05D005545 ORTHO05D006917 3.1e-88 329.3 298 54.0
Cc00_g05310 Coffea canephora HOM05D005545 ORTHO05D006917 3.1e-88 329.3 293 56.0
AT3G54460 Arabidopsis thaliana HOM05D005545 ORTHO05D006917 6.9e-88 328.2 298 54.0
Pp3c16_14340 Physcomitrium patens HOM05D005545 ORTHO05D006917 6.9e-88 328.2 292 56.2
TPR.G17827 Trifolium pratense HOM05D005545 ORTHO05D006917 1.5e-87 327.0 300 53.7
Carub.0005s2108 Capsella rubella HOM05D005545 ORTHO05D006917 5.8e-87 325.1 299 53.2
Mapoly0059s0106 Marchantia polymorpha HOM05D005545 ORTHO05D006917 5.8e-87 325.1 275 56.7
DCAR_003247 Daucus carota HOM05D005545 ORTHO05D006917 9.9e-87 324.3 289 54.7
Cpa.g.c44154 Carica papaya HOM05D005545 ORTHO05D006917 3.8e-86 322.4 268 59.0
CBR_g54197 Chara braunii HOM05D005545 ORTHO05D006917 1.4e-85 320.5 298 54.4
Haze_03077 Corylus avellana HOM05D005545 ORTHO05D006917 7.1e-85 318.2 293 53.6
AUR62037185 Chenopodium quinoa HOM05D005545 ORTHO05D006917 1.3e-83 313.9 302 51.7
AUR62026877 Chenopodium quinoa HOM05D005545 ORTHO05D006917 8.7e-83 311.2 302 51.7
Hund15735 Selenicereus undatus HOM05D005545 ORTHO05D006917 6.2e-81 305.1 292 52.7
Hma1.2p1_2114F.1_g314270 Hydrangea macrophylla HOM05D005545 ORTHO05D006917 1.1e-74 284.3 250 54.8
Rhsim07G0066900 Rhododendron simsii HOM05D005545 ORTHO05D006917 1.6e-73 280.4 244 57.0
Sc10g0004410 Simmondsia chinensis HOM05D005545 ORTHO05D006917 2.1e-73 280.0 253 54.2
Nitab4.5_0000320g0210 Nicotiana tabacum HOM05D005545 ORTHO05D006917 3.7e-73 279.3 265 51.7
Sabra03G0147100 Salix brachista HOM05D005545 ORTHO05D006917 1.1e-58 231.1 152 65.8
ATR0745G085 Amborella trichopoda HOM05D005545 ORTHO05D006917 7.7e-55 218.4 138 68.8
Peaxi162Scf00025g01521 Petunia axillaris HOM05D005545 ORTHO05D006917 8.2e-49 198.4 143 63.6
Actinidia06242 Actinidia chinensis HOM05D005545 ORTHO05D006917 3.1e-40 169.9 198 46.0
FAN01G2386 Fragaria x ananassa HOM05D005545 ORTHO05D006917 2.5e-37 160.2 217 43.8
PRCOL_00000400 Prasinoderma coloniale HOM05D005545 ORTHO05D006917 1.0e-35 154.8 263 36.5
MCO04G441 Micromonas commoda HOM05D005545 ORTHO05D006917 2.4e-32 143.7 317 32.8
RcHm_v2.0_Chr1g0323901 Rosa chinensis HOM05D005545 ORTHO05D006917 1.5e-26 124.4 82 64.6
ATR0745G092 Amborella trichopoda HOM05D005545 ORTHO05D006917 4.9e-25 119.4 146 46.6
arahy.Tifrunner.gnm1.ann1.3MZP5F Arachis hypogaea HOM05D005545 ORTHO05D006917 4.7e-20 102.8 77 62.3
Nitab4.5_0010930g0010 Nicotiana tabacum HOM05D000515 ORTHO05D003530 2.2e-09 67.4 184 28.3
RcHm_v2.0_Chr1g0323921 Rosa chinensis HOM05D005545 ORTHO05D006917 7.0e-08 62.4 44 68.2
Aa31LG1G19620 Aethionema arabicum HOM05D000515 ORTHO05D003530 9.2e-08 62.0 183 26.8
Aa31LG1G19630 Aethionema arabicum HOM05D000515 ORTHO05D003530 9.2e-08 62.0 183 26.8
A10p03680 Brassica napus HOM05D003747 ORTHO05D005080 2.0e-07 60.8 188 29.8
BraA10t42641Z Brassica rapa HOM05D003747 ORTHO05D005080 2.0e-07 60.8 188 29.8
Psat7g203440 Pisum sativum HOM05D000515 ORTHO05D003530 6.0e-07 59.3 195 27.2
AagrBONN_evm.TU.Sc2ySwM_117.943 Anthoceros agrestis HOM05D005545 ORTHO05D006917 1.0e-06 58.5 49 57.1
FvH4_4g03180 Fragaria vesca HOM05D000515 ORTHO05D003188 3.0e-06 57.0 180 28.3
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 8.6e-06 55.5 207 23.7
RcHm_v2.0_Chr4g0391801 Rosa chinensis HOM05D000515 ORTHO05D003188 8.6e-06 55.5 180 27.8


User provided reference genes

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