Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 2.4e-231 805.1 380 100.0
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 4.8e-115 418.7 255 80.4
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 1.1e-63 248.1 238 50.4
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 3.1e-61 240.0 228 51.3
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 4.0e-61 239.6 246 50.0
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 6.8e-61 238.8 225 52.4
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 5.8e-60 235.7 224 49.6
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 2.9e-59 233.4 283 43.5
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 4.9e-59 232.6 227 51.5
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 8.3e-59 231.9 224 52.7
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 1.9e-58 230.7 227 48.9
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.9e-58 230.7 228 51.3
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 2.4e-58 230.3 225 51.1
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 2.4e-58 230.3 228 50.0
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 3.2e-58 229.9 212 50.0
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 4.1e-58 229.6 239 51.9
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 5.4e-58 229.2 222 50.5
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 5.4e-58 229.2 229 49.8
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 7.0e-58 228.8 229 51.1
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 9.2e-58 228.4 227 48.9
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 9.2e-58 228.4 227 48.5
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 9.2e-58 228.4 228 50.9
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 1.6e-57 227.6 228 50.4
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 1.6e-57 227.6 273 45.8
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 2.0e-57 227.3 228 50.4
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 3.5e-57 226.5 225 52.0
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 4.6e-57 226.1 226 48.7
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 4.6e-57 226.1 229 49.3
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 6.0e-57 225.7 227 48.9
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 6.0e-57 225.7 228 48.7
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 6.0e-57 225.7 228 48.7
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 6.0e-57 225.7 227 48.0
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 7.8e-57 225.3 226 47.8
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.0e-56 224.9 287 43.2
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 1.0e-56 224.9 228 49.6
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 1.0e-56 224.9 225 50.7
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 1.3e-56 224.6 229 52.0
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 2.3e-56 223.8 225 49.8
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 3.0e-56 223.4 229 52.0
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 3.0e-56 223.4 224 50.9
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 6.6e-56 222.2 226 49.1
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 6.6e-56 222.2 226 47.3
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 6.6e-56 222.2 228 48.7
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 1.1e-55 221.5 226 47.8
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 1.1e-55 221.5 225 48.9
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 1.9e-55 220.7 226 46.5
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 1.9e-55 220.7 225 49.3
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 2.5e-55 220.3 245 47.3
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 2.5e-55 220.3 224 50.4
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 3.3e-55 219.9 231 50.2
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 3.3e-55 219.9 234 48.3
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 3.3e-55 219.9 225 48.9
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 5.6e-55 219.2 218 49.1
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 7.3e-55 218.8 247 49.0
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 9.5e-55 218.4 235 46.8
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 1.6e-54 217.6 234 46.2
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 3.6e-54 216.5 225 48.4
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 6.2e-54 215.7 224 50.0
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 6.2e-54 215.7 228 48.7
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 1.1e-53 214.9 228 48.7
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 1.4e-53 214.5 225 47.6
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.4e-53 214.5 239 47.3
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 3.1e-53 213.4 230 47.4
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 3.1e-53 213.4 225 46.7
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 3.1e-53 213.4 228 46.5
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 5.2e-53 212.6 223 46.6
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 2.0e-52 210.7 227 48.0
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 3.4e-52 209.9 228 48.2
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 4.4e-52 209.5 224 50.0
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 5.8e-52 209.1 228 49.1
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 1.3e-51 208.0 225 45.3
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 2.9e-51 206.8 228 45.6
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.7e-51 206.5 225 44.9
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 3.7e-51 206.5 286 42.7
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 8.3e-51 205.3 247 43.3
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 1.1e-50 204.9 228 49.1
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 1.9e-50 204.1 244 46.3
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 2.4e-50 203.8 223 46.2
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 5.4e-50 202.6 223 45.7
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.1e-49 200.7 226 48.2
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 2.7e-49 200.3 223 44.8
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 1.0e-48 198.4 231 45.0
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 1.0e-48 198.4 232 45.3
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.3e-48 197.2 256 45.7
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 3.9e-48 196.4 228 45.6
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 3.9e-48 196.4 224 44.6
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 3.3e-47 193.4 174 54.0
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 6.2e-46 189.1 285 40.0
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 8.1e-46 188.7 142 69.0
SMO290G0017 Selaginella moellendorffii HOM05D001672 ORTHO05D006785 4.0e-45 186.4 392 35.7
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 3.4e-44 183.3 279 37.3
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 1.7e-43 181.0 236 42.8
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 6.0e-41 172.6 171 50.9
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 1.1e-37 161.8 224 40.2
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 1.0e-32 145.2 229 39.3
SMO356G0296 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 6.9e-29 132.5 100 67.0
Lalb_Chr05g0229861 Lupinus albus HOM05D005767 ORTHO05D006785 2.9e-27 127.1 110 50.0
SEGI_12703 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 3.8e-27 126.7 129 51.9
MCO08G331 Micromonas commoda HOM05D005767 ORTHO05D006785 2.8e-22 110.5 210 33.3
FAN28G0764 Fragaria x ananassa HOM05D005767 ORTHO05D006785 3.6e-22 110.2 97 53.6
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 4.8e-22 109.8 111 45.9
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 2.0e-20 104.4 118 42.4
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 2.2e-19 100.9 120 41.7
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 4.2e-18 96.7 263 29.3
arahy.Tifrunner.gnm1.ann1.S1GY7D Arachis hypogaea HOM05D005767 ORTHO05D006785 6.0e-17 92.8 152 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1514 Anthoceros agrestis HOM05D005767 ORTHO05D006785 1.0e-16 92.0 210 29.5
SMO356G0207 Selaginella moellendorffii HOM05D001672 ORTHO05D006785 3.9e-16 90.1 61 70.5
SMO235G0003 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 7.4e-15 85.9 40 95.0
SEGI_01145 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 6.9e-13 79.3 62 58.1
Psat7g239040 Pisum sativum HOM05D005767 ORTHO05D006785 7.6e-12 75.9 59 55.9
Pp3c3_16930 Physcomitrium patens HOM05D005767 ORTHO05D006785 1.3e-11 75.1 201 29.4
Cfa024213 Carpinus fangiana HOM05D005767 ORTHO05D006785 6.5e-11 72.8 157 32.5
Cre12.g532750 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 6.5e-11 72.8 118 38.1
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 3.2e-10 70.5 40 72.5
Lsat_1_v5_gn_9_7060 Lactuca sativa HOM05D005767 ORTHO05D006785 5.5e-10 69.7 113 35.4
MBI09_g45348_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 7.1e-10 69.3 46 58.7
Cre12.g534151 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 3.5e-09 67.0 102 37.3
CBR_g48654 Chara braunii HOM05D005767 ORTHO05D006785 1.8e-08 64.7 74 45.9
arahy.Tifrunner.gnm1.ann1.R2J7CI Arachis hypogaea HOM05D005767 ORTHO05D006785 4.3e-07 60.1 39 66.7
arahy.Tifrunner.gnm1.ann1.JHI6E6 Arachis hypogaea HOM05D005767 ORTHO05D006785 2.8e-06 57.4 37 67.6
Glyma.16G128500 Glycine max HOM05D005767 ORTHO05D006785 3.7e-06 57.0 61 47.5
Cre07.g350550 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 4.8e-06 56.6 72 38.9


User provided reference genes

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