Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO273G0010 Selaginella moellendorffii HOM05D000113 ORTHO05D008110 0.0e+00 1440.2 711 100.0
SMO147G0086 Selaginella moellendorffii HOM05D000113 ORTHO05D008110 1.1e-285 986.5 718 75.5
SMO147G0281 Selaginella moellendorffii HOM05D000113 ORTHO05D008110 1.3e-254 883.2 758 66.1
SMO147G0285 Selaginella moellendorffii HOM05D000113 ORTHO05D008110 3.4e-231 805.4 748 62.8
Mapoly0080s0073 Marchantia polymorpha HOM05D000113 ORTHO05D008110 3.1e-91 340.5 793 30.8
Ciclev10018660m.g Citrus clementina HOM05D000113 ORTHO05D008110 2.0e-74 284.6 773 29.9
ATR0796G147 Amborella trichopoda HOM05D000113 ORTHO05D008110 5.5e-72 276.6 781 29.1
Nn3g21480 Nelumbo nucifera HOM05D000113 ORTHO05D008110 5.5e-72 276.6 757 31.2
Lj5g0009328 Lotus japonicus HOM05D000113 ORTHO05D008110 9.4e-72 275.8 759 30.0
CARHR143070 Cardamine hirsuta HOM05D000113 ORTHO05D008110 1.4e-70 271.9 769 29.9
PSO170G4966 Papaver somniferum HOM05D000113 ORTHO05D008110 1.4e-70 271.9 773 28.8
Prupe.8G260900 Prunus persica HOM05D000113 ORTHO05D008110 1.4e-70 271.9 764 28.5
Actinidia24825 Actinidia chinensis HOM05D000113 ORTHO05D008110 1.8e-70 271.6 781 29.4
Thhalv10001290m.g Eutrema salsugineum HOM05D000113 ORTHO05D008110 3.0e-70 270.8 760 28.8
SalBow3G0505 Salvia bowleyana HOM05D000113 ORTHO05D008110 5.2e-70 270.0 798 28.9
PSO407G0393 Papaver somniferum HOM05D000113 ORTHO05D008110 6.7e-70 269.6 770 28.6
BcaNung06419 Brassica carinata HOM05D000113 ORTHO05D008110 1.5e-69 268.5 759 29.5
CiPaw.07G108300 Carya illinoinensis HOM05D000113 ORTHO05D008110 2.6e-69 267.7 763 29.2
Potri.017G031800 Populus trichocarpa HOM05D000113 ORTHO05D008110 3.3e-69 267.3 766 29.0
HanXRQChr06g0163801 Helianthus annuus HOM05D000113 ORTHO05D008110 9.7e-69 265.8 780 29.4
AT2G47680 Arabidopsis thaliana HOM05D000113 ORTHO05D008110 1.1e-67 262.3 762 28.9
Thecc.01G299800 Theobroma cacao HOM05D000113 ORTHO05D008110 1.4e-67 261.9 781 28.8
Manes.01G218500 Manihot esculenta HOM05D000113 ORTHO05D008110 1.8e-67 261.5 753 29.7
HanXRQChr04g0114511 Helianthus annuus HOM05D000113 ORTHO05D008110 2.4e-67 261.2 763 30.1
Duzib138G1325 Durio zibethinus HOM05D000113 ORTHO05D008110 4.1e-67 260.4 756 29.1
Lalb_Chr06g0163501 Lupinus albus HOM05D000113 ORTHO05D008110 4.1e-67 260.4 751 29.6
MSTRG.18154 Avicennia marina HOM05D000113 ORTHO05D008110 5.3e-67 260.0 766 29.1
BcaC02g12550 Brassica carinata HOM05D000113 ORTHO05D008110 5.3e-67 260.0 750 28.9
COL.COLO4_23351 Corchorus olitorius HOM05D000113 ORTHO05D008110 1.2e-66 258.8 807 28.6
Lsat_1_v5_gn_8_163500 Lactuca sativa HOM05D000113 ORTHO05D008110 1.2e-66 258.8 770 29.6
Sc24g0003800 Simmondsia chinensis HOM05D000113 ORTHO05D008110 1.2e-66 258.8 763 28.6
A05p00280 Brassica napus HOM05D000113 ORTHO05D008110 1.6e-66 258.5 750 29.3
BraA05t19025Z Brassica rapa HOM05D000113 ORTHO05D008110 1.6e-66 258.5 750 29.3
Psat6g166080 Pisum sativum HOM05D000113 ORTHO05D008110 1.6e-66 258.5 774 29.5
BolC4t21666H Brassica oleracea HOM05D000113 ORTHO05D008110 2.6e-66 257.7 750 29.1
Gohir.D12G134400 Gossypium hirsutum HOM05D000113 ORTHO05D008110 2.6e-66 257.7 772 28.5
Gorai.008G145400 Gossypium raimondii HOM05D000113 ORTHO05D008110 2.6e-66 257.7 772 28.5
Atru.chr5.1152 Acer truncatum HOM05D000113 ORTHO05D008110 3.5e-66 257.3 771 29.1
C04p00190 Brassica napus HOM05D000113 ORTHO05D008110 3.5e-66 257.3 750 29.1
Ca_10340_v3 Cicer arietinum L. HOM05D000113 ORTHO05D008110 5.9e-66 256.5 753 29.7
CSS0020045 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D008110 7.7e-66 256.1 757 29.7
Eucgr.K03477 Eucalyptus grandis HOM05D000113 ORTHO05D008110 1.3e-65 255.4 752 28.9
AL4G47250 Arabidopsis lyrata HOM05D000113 ORTHO05D008110 1.7e-65 255.0 753 29.2
Carub.0004s3040 Capsella rubella HOM05D000113 ORTHO05D008110 2.2e-65 254.6 752 29.0
Gohir.A12G130600 Gossypium hirsutum HOM05D000113 ORTHO05D008110 2.9e-65 254.2 700 29.4
TAR365G0742 Trochodendron aralioides HOM05D000113 ORTHO05D008110 3.8e-65 253.8 750 29.6
THA.LOC104817498 Tarenaya hassleriana HOM05D000113 ORTHO05D008110 5.0e-65 253.4 769 29.6
Ah.08g213060 Amaranthus hybridus HOM05D000113 ORTHO05D008110 6.5e-65 253.1 770 28.6
TWI23G0215 Tripterygium wilfordii HOM05D000113 ORTHO05D008110 6.5e-65 253.1 756 28.8
TAR636G2876 Trochodendron aralioides HOM05D000113 ORTHO05D008110 8.5e-65 252.7 750 28.5
Medtr1g088590 Medicago truncatula HOM05D000113 ORTHO05D008110 1.1e-64 252.3 769 29.3
FvH4_2g25691 Fragaria vesca HOM05D000113 ORTHO05D008110 1.5e-64 251.9 767 28.3
FAN24G2368 Fragaria x ananassa HOM05D000113 ORTHO05D008110 1.5e-64 251.9 767 28.3
ECA236G2215 Erigeron canadensis HOM05D000113 ORTHO05D008110 1.9e-64 251.5 753 29.7
Migut.D00214 Erythranthe guttata HOM05D000113 ORTHO05D008110 1.9e-64 251.5 770 27.7
Cfa005918 Carpinus fangiana HOM05D000113 ORTHO05D008110 4.2e-64 250.4 768 28.4
SGA_v2.0_scaffold2G01396 Striga asiatica HOM05D000113 ORTHO05D008110 4.2e-64 250.4 764 28.1
Lj2A1194T51 Lonicera japonica HOM05D000113 ORTHO05D008110 5.5e-64 250.0 794 28.1
QL12p028521 Quercus lobata HOM05D000113 ORTHO05D008110 7.2e-64 249.6 762 28.3
GSVIVG01027995001 Vitis vinifera HOM05D000113 ORTHO05D008110 9.4e-64 249.2 783 29.2
Zm00001eb333510 Zea mays HOM05D000113 ORTHO05D008110 9.4e-64 249.2 756 27.6
Aqoxy5G00751 Aquilegia oxysepala HOM05D000113 ORTHO05D008110 1.6e-63 248.4 760 28.9
TPR.G33994 Trifolium pratense HOM05D000113 ORTHO05D008110 2.1e-63 248.1 778 28.1
RcHm_v2.0_Chr6g0293951 Rosa chinensis HOM05D000113 ORTHO05D008110 2.7e-63 247.7 766 28.1
EL10Ac7g17516 Beta vulgaris HOM05D000113 ORTHO05D008110 4.7e-63 246.9 762 29.4
FAN15G1622 Fragaria x ananassa HOM05D000113 ORTHO05D008110 6.1e-63 246.5 767 27.8
Cc01_g20800 Coffea canephora HOM05D000113 ORTHO05D008110 2.3e-62 244.6 770 27.9
Migut.B01151 Erythranthe guttata HOM05D000113 ORTHO05D008110 6.7e-62 243.0 770 26.9
FAN20G1487 Fragaria x ananassa HOM05D000113 ORTHO05D008110 4.4e-61 240.4 767 27.6
CAN.G1989.5 Capsicum annuum HOM05D000113 ORTHO05D008110 9.7e-61 239.2 768 29.2
DCAR_002827 Daucus carota HOM05D000113 ORTHO05D008110 1.7e-60 238.4 756 28.8
Os01g0256800 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D008110 2.8e-60 237.7 771 27.8
Nitab4.5_0005805g0010 Nicotiana tabacum HOM05D000113 ORTHO05D008110 1.1e-59 235.7 766 28.2
Sabra17G0020300 Salix brachista HOM05D000113 ORTHO05D008110 2.4e-59 234.6 789 26.9
vmacro15006 Vaccinium macrocarpon HOM05D000113 ORTHO05D008110 2.4e-59 234.6 802 27.6
MD03G1287700 Malus domestica HOM05D000113 ORTHO05D008110 4.1e-59 233.8 761 26.9
Peaxi162Scf00399g00810 Petunia axillaris HOM05D000113 ORTHO05D008110 4.1e-59 233.8 764 28.4
arahy.Tifrunner.gnm1.ann1.BY1460 Arachis hypogaea HOM05D000113 ORTHO05D008110 1.6e-58 231.9 752 27.7
CsaV3_4G000770 Cucumis sativus L. HOM05D000113 ORTHO05D008110 2.0e-58 231.5 783 27.1
Sed0019854 Sechium edule HOM05D000113 ORTHO05D008110 2.7e-58 231.1 760 27.4
PGR044G1807 Punica granatum HOM05D000113 ORTHO05D008110 1.3e-57 228.8 661 28.7
Rhsim01G0284800 Rhododendron simsii HOM05D000113 ORTHO05D008110 1.7e-57 228.4 799 27.0
AUR62033138 Chenopodium quinoa HOM05D000113 ORTHO05D008110 7.2e-56 223.0 711 29.0
Nitab4.5_0002470g0060 Nicotiana tabacum HOM05D000113 ORTHO05D008110 6.1e-55 219.9 777 27.2
Haze_04932 Corylus avellana HOM05D000113 ORTHO05D008110 8.0e-55 219.5 782 26.2
Sopen06g003870 Solanum pennellii HOM05D000113 ORTHO05D008110 1.0e-54 219.2 762 27.7
Solyc06g009070.3 Solanum lycopersicum HOM05D000113 ORTHO05D008110 3.0e-54 217.6 762 27.7
arahy.Tifrunner.gnm1.ann1.94GFRR Arachis hypogaea HOM05D000113 ORTHO05D008110 4.8e-52 210.3 782 25.8
Dinv19697 Davidia involucrata HOM05D000113 ORTHO05D008110 2.4e-51 208.0 611 29.6
MELO3C017959.2 Cucumis melo HOM05D000113 ORTHO05D008110 1.0e-49 202.6 689 27.3
HPP92_000109 Vanilla planifolia HOM05D000113 ORTHO05D008110 1.7e-49 201.8 732 27.9
AUR62008633 Chenopodium quinoa HOM05D000113 ORTHO05D008110 5.0e-49 200.3 690 28.0
unitig_22.g5242 Utricularia gibba HOM05D000113 ORTHO05D008110 7.2e-48 196.4 652 28.7
Eucgr.K03485 Eucalyptus grandis HOM05D000113 ORTHO05D008110 5.7e-45 186.8 577 27.6
Eucgr.K03481 Eucalyptus grandis HOM05D000113 ORTHO05D008110 1.0e-41 176.0 556 27.9
Cpa.g.sc9.265 Carica papaya HOM05D000113 ORTHO05D008110 1.7e-41 175.3 720 26.1
ClCG10G010890 Citrullus lanatus HOM05D000113 ORTHO05D008110 2.3e-41 174.9 809 24.8
Sp4g29610 Schrenkiella parvula HOM05D000113 ORTHO05D008110 2.3e-41 174.9 529 27.8
Hund18149 Selenicereus undatus HOM05D000113 ORTHO05D008110 2.1e-39 168.3 804 24.0
Eucgr.K03483 Eucalyptus grandis HOM05D000113 ORTHO05D008110 2.2e-36 158.3 558 26.3
Oeu046683.2 Olea europaea HOM05D000113 ORTHO05D008110 7.3e-32 143.3 861 23.0
Eucgr.K03484 Eucalyptus grandis HOM05D000113 ORTHO05D008110 1.6e-31 142.1 460 28.0
SMO147G0022 Selaginella moellendorffii HOM05D000059 ORTHO05D377367 2.3e-30 138.3 75 92.0
BcaB02g08754 Brassica carinata HOM05D000113 ORTHO05D008110 3.1e-30 137.9 590 25.8
SMO275G0024 Selaginella moellendorffii HOM05D000059 ORTHO05D377871 2.4e-27 128.3 81 84.0
PSO170G4996 Papaver somniferum HOM05D000113 ORTHO05D008110 7.0e-27 126.7 351 27.9
SMO147G0206 Selaginella moellendorffii HOM05D000059 ORTHO05D379419 3.5e-26 124.4 70 88.6
CSS0030253 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D008110 3.6e-23 114.4 479 25.7
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 4.1e-19 100.9 453 26.0
Rhsim01G0284900 Rhododendron simsii HOM05D000113 ORTHO05D008110 1.2e-15 89.4 343 25.7
Eucgr.K03480 Eucalyptus grandis HOM05D000113 ORTHO05D008110 1.4e-14 85.9 202 33.7
Eucgr.K03482 Eucalyptus grandis HOM05D000113 ORTHO05D008110 2.0e-13 82.0 202 33.2
SMO361G0657 Selaginella moellendorffii HOM05D001343 ORTHO05D002008 2.6e-13 81.6 160 35.6
SEGI_14043 Sequoiadendron giganteum HOM05D000113 ORTHO05D008110 2.9e-12 78.2 139 40.3
BolC4t21740H Brassica oleracea HOM05D000113 ORTHO05D039491 3.0e-09 68.2 53 58.5
BcaC02g12611 Brassica carinata HOM05D000113 ORTHO05D039491 6.6e-09 67.0 56 58.9
Sp4g29620 Schrenkiella parvula HOM05D000113 ORTHO05D008110 6.6e-09 67.0 178 33.1
SMO361G0082 Selaginella moellendorffii HOM05D055829 ORTHO05D002008 4.0e-06 57.8 34 82.4


User provided reference genes

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