Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO198G0039 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 2.6e-112 408.7 198 100.0
SMO172G0198 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 4.5e-56 221.9 140 80.7
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 1.0e-52 210.7 146 74.0
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 1.7e-31 140.2 148 50.0
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 2.2e-31 139.8 148 50.0
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 2.9e-31 139.4 148 48.6
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 2.9e-31 139.4 148 49.3
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 6.5e-31 138.3 148 47.3
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 6.5e-31 138.3 148 49.3
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 6.5e-31 138.3 149 47.7
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 1.1e-30 137.5 148 50.7
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 1.5e-30 137.1 149 48.3
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 5.5e-30 135.2 148 48.0
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 5.5e-30 135.2 148 48.0
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 7.2e-30 134.8 151 48.3
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 7.2e-30 134.8 148 46.6
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 7.2e-30 134.8 148 50.0
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 9.4e-30 134.4 168 44.6
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 9.4e-30 134.4 148 47.3
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.2e-29 134.0 148 47.3
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 1.6e-29 133.7 148 45.9
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 2.1e-29 133.3 151 47.7
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 2.1e-29 133.3 148 48.6
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 2.1e-29 133.3 148 46.6
Dinv17832 Davidia involucrata HOM05D006350 ORTHO05D007850 2.7e-29 132.9 148 46.6
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 2.7e-29 132.9 148 47.3
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 3.6e-29 132.5 149 47.7
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 4.7e-29 132.1 148 48.0
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 6.1e-29 131.7 149 47.7
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 8.0e-29 131.3 149 47.0
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 8.0e-29 131.3 148 47.3
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 8.0e-29 131.3 148 45.3
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 1.0e-28 131.0 150 46.0
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 1.0e-28 131.0 148 47.3
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 1.4e-28 130.6 150 46.7
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 1.8e-28 130.2 148 45.9
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 2.3e-28 129.8 148 46.6
Haze_08403 Corylus avellana HOM05D006350 ORTHO05D007850 2.3e-28 129.8 148 45.9
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 2.3e-28 129.8 148 45.9
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 2.3e-28 129.8 148 45.3
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 3.0e-28 129.4 148 45.9
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 3.0e-28 129.4 148 45.3
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 3.0e-28 129.4 148 47.3
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 3.0e-28 129.4 148 44.6
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 4.0e-28 129.0 148 45.9
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 4.0e-28 129.0 151 46.4
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 4.0e-28 129.0 148 44.6
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 5.2e-28 128.6 149 45.6
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 5.2e-28 128.6 149 45.6
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 5.2e-28 128.6 148 45.3
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 5.2e-28 128.6 148 45.3
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 5.2e-28 128.6 148 45.9
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 44.6
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 44.6
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 46.6
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 45.3
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 45.9
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 45.9
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 6.7e-28 128.3 148 45.9
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 1.1e-27 127.5 148 45.9
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 1.1e-27 127.5 148 45.9
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 1.5e-27 127.1 97 60.8
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 1.5e-27 127.1 148 45.9
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 1.5e-27 127.1 148 44.6
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 2.0e-27 126.7 148 44.6
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 2.0e-27 126.7 148 44.6
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 2.0e-27 126.7 148 44.6
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 2.6e-27 126.3 148 43.9
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 3.3e-27 125.9 148 45.9
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 3.3e-27 125.9 147 50.3
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 3.3e-27 125.9 148 45.3
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 3.3e-27 125.9 148 45.3
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 3.3e-27 125.9 147 45.6
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 3.3e-27 125.9 148 44.6
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 4.4e-27 125.6 148 45.9
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 4.4e-27 125.6 148 43.9
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 5.7e-27 125.2 148 44.6
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 9.7e-27 124.4 148 45.9
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 1.7e-26 123.6 148 45.9
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 1.7e-26 123.6 148 45.9
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 1.7e-26 123.6 148 45.9
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 2.2e-26 123.2 148 46.6
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 2.8e-26 122.9 148 45.9
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 3.7e-26 122.5 148 43.9
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 4.8e-26 122.1 148 43.2
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 4.8e-26 122.1 146 43.8
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 4.8e-26 122.1 148 44.6
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 6.3e-26 121.7 148 44.6
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 6.3e-26 121.7 150 44.7
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 8.2e-26 121.3 147 44.9
Hund21368 Selenicereus undatus HOM05D006350 ORTHO05D007850 1.8e-25 120.2 148 43.9
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 7.0e-25 118.2 151 42.4
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 2.0e-24 116.7 141 43.3
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 1.3e-23 114.0 169 37.3
HPP92_017615 Vanilla planifolia HOM05D006350 ORTHO05D007850 1.5e-22 110.5 97 53.6
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.9e-22 110.2 147 40.1
Hund21371 Selenicereus undatus HOM05D006350 ORTHO05D007850 7.2e-22 108.2 97 54.6
Lsat_1_v5_gn_1_127601 Lactuca sativa HOM05D006350 ORTHO05D000125 1.8e-20 103.6 112 47.3
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 6.8e-20 101.7 135 44.4
VMungo0251G1161 Vigna mungo HOM05D006350 ORTHO05D007850 1.2e-19 100.9 133 42.1
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.6e-19 99.8 135 43.7
PRCOL_00001871 Prasinoderma coloniale HOM05D006350 ORTHO05D007850 1.0e-12 77.8 129 38.8
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 1.4e-12 77.4 145 36.6
MCO12G349 Micromonas commoda HOM05D006350 ORTHO05D007850 4.4e-11 72.4 97 43.3
Cre01.g053200 Chlamydomonas reinhardtii HOM05D006350 ORTHO05D007850 1.9e-06 57.0 37 64.9
C03p17100 Brassica napus HOM05D006350 ORTHO05D007850 2.5e-06 56.6 37 67.6
BolC3t14124H Brassica oleracea HOM05D006350 ORTHO05D007850 2.5e-06 56.6 37 67.6


User provided reference genes

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