Gene: Carub.0006s1334

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1334
  • Transcript Identifier Carub.0006s1334.1
  • Gene Type Coding gene
  • Location scaffold_6 : 4970930-4974184 : negative

Gene Family Information

  • ID HOM05D006350
  • #Genes/#Species 125/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1334.v1.1
  • pacid 39246807
  • synonym Carubv10003786m.g

Descriptions

  • Description K10862 - tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] (TDP1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008081
IEA
InterProphosphoric diester hydrolase activity
GO:0005515
IEA
InterProprotein binding
GO:0017005
ISO
PLAZA Integrative Orthology3'-tyrosyl-DNA phosphodiesterase activity AT5G15170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010347 Tyrosyl-DNA phosphodiesterase I
IPR000253 Forkhead-associated (FHA) domain
IPR008984 SMAD/FHA domain superfamily
Mapman id Description
14.10.1 DNA damage response.DNA-protein crosslink (DPC) repair.tyrosyl-DNA phosphodiesterase (TDP1)