Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO175G0006 Selaginella moellendorffii HOM05D017119 ORTHO05D006182 3.0e-131 471.9 240 100.0
SMO274G0070 Selaginella moellendorffii HOM05D017119 ORTHO05D004754 5.6e-45 185.3 186 59.1
SMO353G0093 Selaginella moellendorffii HOM05D017119 ORTHO05D375408 3.4e-42 176.0 205 55.1
SMO364G0099 Selaginella moellendorffii HOM05D017119 ORTHO05D377419 3.3e-37 159.5 190 54.2
SMO011G0039 Selaginella moellendorffii HOM05D017119 ORTHO05D378887 2.6e-26 123.2 165 49.1
Migut.M00727 Erythranthe guttata HOM05D005043 ORTHO05D006182 1.0e-17 94.7 276 31.5
MSTRG.12865 Avicennia marina HOM05D005043 ORTHO05D006182 2.2e-17 93.6 226 32.7
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis HOM05D005043 ORTHO05D006182 4.2e-16 89.4 186 31.2
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea HOM05D005043 ORTHO05D006182 4.2e-16 89.4 190 32.1
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 4.2e-16 89.4 161 33.5
SMO116G0162 Selaginella moellendorffii HOM05D017119 ORTHO05D376782 4.2e-16 89.4 89 57.3
SalBow8G1024 Salvia bowleyana HOM05D005043 ORTHO05D006182 7.2e-16 88.6 204 34.3
SMO137G0206 Selaginella moellendorffii HOM05D005043 ORTHO05D006182 1.2e-15 87.8 57 71.9
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 1.6e-15 87.4 195 30.8
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea HOM05D005043 ORTHO05D006182 2.7e-15 86.7 188 31.9
TWI38G0078 Tripterygium wilfordii HOM05D005043 ORTHO05D006182 2.7e-15 86.7 249 28.1
Sed0006465 Sechium edule HOM05D005043 ORTHO05D006182 3.6e-15 86.3 217 30.0
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 4.7e-15 85.9 159 35.2
SalBow1G3547 Salvia bowleyana HOM05D005043 ORTHO05D006182 4.7e-15 85.9 195 35.9
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 6.1e-15 85.5 199 28.6
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 7.9e-15 85.1 194 32.5
Lalb_Chr03g0031161 Lupinus albus HOM05D005043 ORTHO05D006182 7.9e-15 85.1 207 30.9
MELO3C025641.2 Cucumis melo HOM05D005043 ORTHO05D006182 1.0e-14 84.7 236 28.0
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 1.0e-14 84.7 160 34.4
VMungo1127G0129 Vigna mungo HOM05D005043 ORTHO05D006182 1.0e-14 84.7 228 29.4
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 1.4e-14 84.3 253 24.5
Ciclev10023741m.g Citrus clementina HOM05D005043 ORTHO05D006182 1.8e-14 84.0 217 27.2
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 1.8e-14 84.0 201 29.4
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 2.3e-14 83.6 202 29.2
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 3.0e-14 83.2 212 28.8
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 3.9e-14 82.8 160 33.8
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 3.9e-14 82.8 160 33.1
Phvul.011G162300 Phaseolus vulgaris HOM05D005043 ORTHO05D006182 3.9e-14 82.8 228 28.9
SMO361G0766 Selaginella moellendorffii HOM05D011999 ORTHO05D378941 3.9e-14 82.8 51 80.4
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 5.1e-14 82.4 161 34.2
TAR636G1993 Trochodendron aralioides HOM05D005043 ORTHO05D006182 5.1e-14 82.4 273 27.1
SMO122G0016 Selaginella moellendorffii HOM05D017119 ORTHO05D375113 8.8e-14 81.6 70 62.9
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 1.1e-13 81.3 186 30.1
CsaV3_4G033100 Cucumis sativus L. HOM05D005043 ORTHO05D006182 1.1e-13 81.3 236 27.5
Lj1C829T6 Lonicera japonica HOM05D005043 ORTHO05D006182 2.6e-13 80.1 216 28.7
Thecc.07G117100 Theobroma cacao HOM05D005043 ORTHO05D006182 3.3e-13 79.7 192 31.8
COL.COLO4_17542 Corchorus olitorius HOM05D005043 ORTHO05D006182 5.7e-13 79.0 189 30.2
Sc16g0007590 Simmondsia chinensis HOM05D005043 ORTHO05D006182 5.7e-13 79.0 199 31.7
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 7.4e-13 78.6 213 28.6
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 7.4e-13 78.6 238 29.0
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 7.4e-13 78.6 208 29.8
Gohir.D01G042722 Gossypium hirsutum HOM05D005043 ORTHO05D006182 1.3e-12 77.8 194 29.4
Gorai.002G054600 Gossypium raimondii HOM05D005043 ORTHO05D006182 1.3e-12 77.8 194 29.4
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 1.3e-12 77.8 218 28.0
Gohir.A01G054300 Gossypium hirsutum HOM05D005043 ORTHO05D006182 1.7e-12 77.4 194 29.4
ATR1131G028 Amborella trichopoda HOM05D005043 ORTHO05D006182 2.2e-12 77.0 216 31.5
CANSAT35G1445 Cannabis sativa HOM05D005043 ORTHO05D006182 2.2e-12 77.0 211 28.9
Pp3c6_17140 Physcomitrium patens HOM05D005043 ORTHO05D006182 2.8e-12 76.6 103 41.7
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 3.7e-12 76.3 273 26.4
DCAR_017172 Daucus carota HOM05D005043 ORTHO05D006182 3.7e-12 76.3 190 30.0
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 4.8e-12 75.9 219 28.8
Mapoly0056s0069 Marchantia polymorpha HOM05D005043 ORTHO05D006182 4.8e-12 75.9 199 29.1
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 4.8e-12 75.9 268 24.3
SGA_v2.0_scaffold70G23376 Striga asiatica HOM05D005043 ORTHO05D006182 4.8e-12 75.9 238 29.0
PGSC0003DMG400007070 Solanum tuberosum HOM05D005043 ORTHO05D006182 6.3e-12 75.5 188 28.7
Duzib213G0837 Durio zibethinus HOM05D005043 ORTHO05D006182 8.2e-12 75.1 53 64.2
Lj3g0009561 Lotus japonicus HOM05D005043 ORTHO05D006182 8.2e-12 75.1 209 29.7
HPP92_009836 Vanilla planifolia HOM05D005043 ORTHO05D006182 1.1e-11 74.7 68 50.0
Medtr6g466500 Medicago truncatula HOM05D005043 ORTHO05D006182 1.4e-11 74.3 203 28.1
TPR.G12585 Trifolium pratense HOM05D005043 ORTHO05D006182 1.4e-11 74.3 188 28.7
Cc05_g11070 Coffea canephora HOM05D005043 ORTHO05D006182 3.1e-11 73.2 220 27.3
MBI06_g29324_MAGBIO Magnolia biondii HOM05D005043 ORTHO05D006182 3.1e-11 73.2 55 56.4
Eucgr.F01242 Eucalyptus grandis HOM05D005043 ORTHO05D006182 5.3e-11 72.4 79 45.6
Glyma.06G229100 Glycine max HOM05D005043 ORTHO05D006182 5.3e-11 72.4 57 52.6
Os01g0737300 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 5.3e-11 72.4 202 27.7
PGR083G1657 Punica granatum HOM05D005043 ORTHO05D006182 5.3e-11 72.4 70 45.7
Ca_26224_v3 Cicer arietinum L. HOM05D005043 ORTHO05D006182 6.9e-11 72.0 208 29.3
Manes.15G094900 Manihot esculenta HOM05D005043 ORTHO05D006182 6.9e-11 72.0 70 47.1
Nn7g37328 Nelumbo nucifera HOM05D005043 ORTHO05D006182 6.9e-11 72.0 55 56.4
CBR_g66772 Chara braunii HOM05D005043 ORTHO05D006182 9.1e-11 71.6 101 39.6
Glyma.12G157700 Glycine max HOM05D005043 ORTHO05D006182 9.1e-11 71.6 57 52.6
ClCG11G017440 Citrullus lanatus HOM05D005043 ORTHO05D006182 1.2e-10 71.2 70 47.1
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 1.5e-10 70.9 282 24.1
Solyc07g062430.3 Solanum lycopersicum HOM05D005043 ORTHO05D006182 2.0e-10 70.5 57 50.9
Sopen07g030670 Solanum pennellii HOM05D005043 ORTHO05D006182 2.0e-10 70.5 57 50.9
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 2.6e-10 70.1 202 29.2
vmacro11941 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 2.6e-10 70.1 53 54.7
vmacro23467 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 2.6e-10 70.1 53 54.7
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 3.4e-10 69.7 53 54.7
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 3.4e-10 69.7 53 54.7
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 3.4e-10 69.7 53 54.7
CDE09G1444 Ceratophyllum demersum HOM05D005043 ORTHO05D006182 3.4e-10 69.7 55 54.5
unitig_749.g13541 Utricularia gibba HOM05D005043 ORTHO05D006182 3.4e-10 69.7 75 44.0
vmacro23385 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 3.4e-10 69.7 68 45.6
Lalb_Chr19g0133801 Lupinus albus HOM05D005043 ORTHO05D006182 5.9e-10 68.9 70 42.9
CAN.G375.16 Capsicum annuum HOM05D005043 ORTHO05D006182 7.7e-10 68.6 57 50.9
Cpa.g.sc77.9 Carica papaya HOM05D005043 ORTHO05D006182 7.7e-10 68.6 68 44.1
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 1.3e-09 67.8 53 54.7
BraA03t13053Z Brassica rapa HOM05D005043 ORTHO05D006182 1.3e-09 67.8 53 54.7
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 1.3e-09 67.8 53 54.7
Sabra16G0255900 Salix brachista HOM05D005043 ORTHO05D006182 1.3e-09 67.8 211 26.1
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 1.7e-09 67.4 53 54.7
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 1.7e-09 67.4 53 52.8
CARHR089830 Cardamine hirsuta HOM05D005043 ORTHO05D006182 1.7e-09 67.4 53 52.8
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 5.0e-09 65.9 53 52.8
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 5.0e-09 65.9 55 50.9
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 6.5e-09 65.5 53 52.8
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 6.5e-09 65.5 220 26.8
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 6.5e-09 65.5 53 52.8
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 6.5e-09 65.5 53 52.8
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 8.5e-09 65.1 53 50.9
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 8.5e-09 65.1 53 50.9
Peaxi162Scf00111g01457 Petunia axillaris HOM05D005043 ORTHO05D006182 8.5e-09 65.1 57 45.6
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 1.4e-08 64.3 68 41.2
Oeu031030.1 Olea europaea HOM05D005043 ORTHO05D006182 1.4e-08 64.3 77 39.0
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 1.9e-08 63.9 55 47.3
SMO149G0001 Selaginella moellendorffii HOM05D003320 ORTHO05D011006 2.5e-08 63.5 41 75.6
Hma1.2p1_0113F.1_g055130 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 4.2e-08 62.8 53 50.9
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 4.2e-08 62.8 53 49.1
SMO192G0013 Selaginella moellendorffii HOM05D009261 ORTHO05D011006 7.2e-08 62.0 28 100.0
Haze_09322 Corylus avellana HOM05D005043 ORTHO05D006182 2.1e-07 60.5 57 45.6
SMO199G0080 Selaginella moellendorffii HOM05D003320 ORTHO05D011006 4.7e-07 59.3 40 72.5
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea HOM05D005043 ORTHO05D006182 6.1e-07 58.9 50 52.0
arahy.Tifrunner.gnm1.ann1.5IY6XE Arachis hypogaea HOM05D005043 ORTHO05D006182 6.1e-07 58.9 50 52.0
SMO301G0065 Selaginella moellendorffii HOM05D017119 ORTHO05D376414 3.9e-06 56.2 30 90.0
SMO203G0250 Selaginella moellendorffii HOM05D003499 ORTHO05D004754 8.8e-06 55.1 118 39.8


User provided reference genes

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