Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO172G0198 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 3.3e-175 618.2 302 100.0
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 5.7e-95 351.7 218 81.7
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 2.3e-67 260.0 316 47.8
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 1.1e-66 257.7 297 47.5
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 1.2e-65 254.2 297 47.5
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 6.2e-65 251.9 294 49.0
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 1.8e-64 250.4 300 46.7
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 2.3e-64 250.0 293 47.1
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 5.2e-64 248.8 295 47.8
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 6.8e-64 248.4 295 47.5
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 6.8e-64 248.4 265 52.5
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 8.9e-64 248.1 311 45.0
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 8.9e-64 248.1 310 44.8
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 2.0e-63 246.9 294 48.0
Dinv17832 Davidia involucrata HOM05D006350 ORTHO05D007850 2.0e-63 246.9 319 44.2
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 3.4e-63 246.1 285 47.7
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 3.4e-63 246.1 321 42.4
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 3.4e-63 246.1 220 59.1
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 5.8e-63 245.4 300 46.7
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 7.5e-63 245.0 299 44.8
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 7.5e-63 245.0 346 43.1
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 2.9e-62 243.0 337 43.6
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 2.9e-62 243.0 313 44.7
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 4.9e-62 242.3 295 46.1
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 1.1e-61 241.1 313 45.7
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 1.4e-61 240.7 309 45.3
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 7.1e-61 238.4 309 44.0
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 9.2e-61 238.0 339 43.4
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 1.6e-60 237.3 337 42.7
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 2.7e-60 236.5 325 42.8
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 3.5e-60 236.1 341 41.6
CARHR198140 Cardamine hirsuta HOM05D006350 ORTHO05D007850 6.0e-60 235.3 305 44.6
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 6.0e-60 235.3 317 43.5
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 6.0e-60 235.3 337 42.1
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 7.8e-60 235.0 316 43.4
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 7.8e-60 235.0 326 43.6
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 1.0e-59 234.6 318 43.4
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.3e-59 234.2 313 43.1
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.7e-59 233.8 264 48.5
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 1.7e-59 233.8 325 42.8
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 1.7e-59 233.8 302 44.4
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.7e-59 233.8 317 42.9
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 2.3e-59 233.4 220 54.5
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 2.3e-59 233.4 314 43.0
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 2.3e-59 233.4 316 42.7
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 2.3e-59 233.4 318 42.8
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 2.3e-59 233.4 318 41.8
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 2.3e-59 233.4 317 44.2
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 3.0e-59 233.0 307 43.3
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 5.1e-59 232.3 328 41.2
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 5.1e-59 232.3 299 42.8
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 8.6e-59 231.5 315 42.9
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 8.6e-59 231.5 253 49.0
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 1.1e-58 231.1 318 41.8
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 1.1e-58 231.1 322 41.9
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 1.5e-58 230.7 329 41.6
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 1.5e-58 230.7 313 43.1
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 1.9e-58 230.3 297 44.4
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 1.9e-58 230.3 318 42.8
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 1.9e-58 230.3 323 41.2
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.5e-58 229.9 307 43.3
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 2.5e-58 229.9 313 42.8
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 2.5e-58 229.9 220 55.5
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 2.5e-58 229.9 337 40.4
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 4.3e-58 229.2 319 42.9
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 4.3e-58 229.2 297 44.8
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 4.3e-58 229.2 322 41.6
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 5.6e-58 228.8 322 43.5
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 9.5e-58 228.0 308 43.8
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 1.2e-57 227.6 282 45.7
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 1.2e-57 227.6 252 50.0
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 1.6e-57 227.3 316 43.4
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 2.8e-57 226.5 320 41.6
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 3.6e-57 226.1 314 42.0
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 6.2e-57 225.3 220 54.1
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 1.1e-56 224.6 219 53.0
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 1.1e-56 224.6 333 39.3
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 1.1e-56 224.6 262 46.2
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 1.4e-56 224.2 220 51.8
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 1.4e-56 224.2 220 51.8
Haze_08403 Corylus avellana HOM05D006350 ORTHO05D007850 1.4e-56 224.2 243 49.0
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 1.4e-56 224.2 320 43.8
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 1.8e-56 223.8 256 49.6
SMO198G0039 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 3.1e-56 223.0 140 80.7
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 4.0e-56 222.6 220 52.3
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 1.2e-55 221.1 314 42.7
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 2.6e-55 219.9 278 46.4
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.3e-54 217.6 285 43.5
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 7.8e-52 208.4 306 41.2
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 1.0e-51 208.0 219 52.5
Lsat_1_v5_gn_1_127601 Lactuca sativa HOM05D006350 ORTHO05D000125 1.9e-50 203.8 316 39.2
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 1.6e-49 200.7 354 37.9
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.4e-48 196.8 307 40.4
Hund21368 Selenicereus undatus HOM05D006350 ORTHO05D007850 5.2e-48 195.7 175 55.4
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 8.9e-48 194.9 290 43.1
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 8.9e-48 194.9 423 32.2
Cc02_g11700 Coffea canephora HOM05D006350 ORTHO05D007850 4.9e-46 189.1 166 56.0
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 4.2e-45 186.0 282 39.0
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 3.1e-40 169.9 173 52.0
Hund21371 Selenicereus undatus HOM05D006350 ORTHO05D007850 5.8e-39 165.6 138 58.7
VMungo0251G1161 Vigna mungo HOM05D006350 ORTHO05D007850 7.4e-34 148.7 153 51.6
HPP92_017615 Vanilla planifolia HOM05D006350 ORTHO05D007850 1.3e-30 137.9 114 55.3
PRCOL_00001871 Prasinoderma coloniale HOM05D006350 ORTHO05D007850 4.5e-23 112.8 183 39.9
Cre01.g053200 Chlamydomonas reinhardtii HOM05D006350 ORTHO05D007850 1.3e-22 111.3 287 33.8
MCO12G349 Micromonas commoda HOM05D006350 ORTHO05D007850 3.9e-19 99.8 213 35.2
Eucgr.L01729 Eucalyptus grandis HOM05D006350 ORTHO05D007850 1.4e-13 81.3 303 26.1
MBI04_g30799_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 3.7e-09 66.6 132 34.8
HPP92_017616 Vanilla planifolia HOM05D006350 ORTHO05D007850 3.1e-08 63.5 71 52.1
C03p17100 Brassica napus HOM05D006350 ORTHO05D007850 1.0e-06 58.5 54 55.6
BolC3t14124H Brassica oleracea HOM05D006350 ORTHO05D007850 1.0e-06 58.5 54 55.6
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 3.8e-06 56.6 200 25.0
Cc02_g11710 Coffea canephora HOM05D006350 ORTHO05D007850 8.5e-06 55.5 156 30.8


User provided reference genes

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