Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 5.5e-267 923.7 455 100.0
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 8.4e-175 617.5 589 60.6
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 7.2e-150 534.6 542 57.4
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 2.1e-133 479.9 583 48.7
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 1.8e-132 476.9 539 49.7
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.2e-131 474.2 643 45.7
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 7.5e-131 471.5 587 48.0
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 1.3e-130 470.7 552 48.7
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 1.7e-130 470.3 646 44.9
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 5.3e-129 465.3 582 46.7
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 7.7e-128 461.5 551 48.1
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 1.3e-127 460.7 551 48.5
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 1.3e-127 460.7 577 47.1
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 1.7e-127 460.3 573 46.6
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 2.2e-127 459.9 576 46.9
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 2.9e-127 459.5 555 47.9
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 2.9e-127 459.5 557 48.1
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 2.9e-127 459.5 557 47.4
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 2.9e-127 459.5 578 46.4
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 5.0e-127 458.8 584 46.4
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 8.5e-127 458.0 551 48.5
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 8.5e-127 458.0 557 47.4
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 8.5e-127 458.0 557 47.4
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 8.5e-127 458.0 553 47.7
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 1.1e-126 457.6 553 47.7
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 1.1e-126 457.6 557 48.3
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 1.1e-126 457.6 551 47.7
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 1.5e-126 457.2 557 47.4
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 1.5e-126 457.2 583 46.0
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 1.5e-126 457.2 578 46.7
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 1.9e-126 456.8 555 47.6
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 1.9e-126 456.8 583 46.8
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 2.5e-126 456.4 585 46.2
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 2.5e-126 456.4 551 47.9
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 2.5e-126 456.4 557 47.2
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 2.5e-126 456.4 551 47.5
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 2.5e-126 456.4 551 47.5
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 3.2e-126 456.1 576 46.9
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 3.2e-126 456.1 580 46.0
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 4.2e-126 455.7 551 48.1
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 4.2e-126 455.7 625 45.1
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 5.5e-126 455.3 588 45.6
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 5.5e-126 455.3 550 47.6
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 5.5e-126 455.3 573 46.4
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 7.2e-126 454.9 557 47.2
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 7.2e-126 454.9 578 46.2
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 9.4e-126 454.5 535 49.0
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 9.4e-126 454.5 554 47.5
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 9.4e-126 454.5 578 46.0
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 9.4e-126 454.5 551 47.5
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 1.2e-125 454.1 609 45.2
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 1.2e-125 454.1 554 47.7
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 1.2e-125 454.1 578 46.0
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 1.2e-125 454.1 551 47.5
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 1.2e-125 454.1 577 45.9
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 1.6e-125 453.8 587 45.8
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 1.6e-125 453.8 587 45.7
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 1.6e-125 453.8 557 46.9
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 1.6e-125 453.8 577 46.3
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 2.1e-125 453.4 551 47.9
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 2.1e-125 453.4 551 47.7
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 3.6e-125 452.6 551 47.4
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 3.6e-125 452.6 551 47.4
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 3.6e-125 452.6 578 45.7
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 3.6e-125 452.6 561 47.2
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 3.6e-125 452.6 551 47.2
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 4.7e-125 452.2 587 45.5
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 4.7e-125 452.2 553 47.6
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 4.7e-125 452.2 551 47.5
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 4.7e-125 452.2 587 45.5
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 4.7e-125 452.2 551 47.4
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.0
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.4
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.4
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.4
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.4
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.2
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 6.1e-125 451.8 588 45.4
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 6.1e-125 451.8 551 47.4
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 8.0e-125 451.4 551 47.4
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 8.0e-125 451.4 587 45.5
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 1.0e-124 451.1 551 47.4
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 1.0e-124 451.1 551 47.4
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 1.4e-124 450.7 609 44.5
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 1.4e-124 450.7 551 47.2
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 1.4e-124 450.7 553 47.4
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 1.4e-124 450.7 586 45.2
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 1.4e-124 450.7 557 47.6
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 1.4e-124 450.7 551 47.2
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 1.8e-124 450.3 604 44.5
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 1.8e-124 450.3 557 47.2
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 1.8e-124 450.3 557 47.2
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 1.8e-124 450.3 557 47.2
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 1.8e-124 450.3 582 45.5
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 2.3e-124 449.9 557 47.4
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 2.3e-124 449.9 584 45.5
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 3.0e-124 449.5 587 45.0
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 3.0e-124 449.5 552 48.4
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 4.0e-124 449.1 578 46.0
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 5.2e-124 448.7 551 46.6
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 5.2e-124 448.7 594 44.9
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 2.0e-123 446.8 594 44.8
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 2.0e-123 446.8 557 47.4
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 3.4e-123 446.0 594 44.6
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 3.4e-123 446.0 576 45.3
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 4.4e-123 445.7 609 43.7
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 5.7e-123 445.3 555 46.7
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 2.2e-122 443.4 559 46.5
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 1.8e-121 440.3 559 46.2
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 5.9e-120 435.3 476 51.3
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 5.2e-116 422.2 431 52.7
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 1.3e-114 417.5 459 51.9
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 4.9e-114 415.6 560 44.6
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 1.2e-109 401.0 475 48.4
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 3.5e-96 356.3 355 54.1
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 6.6e-95 352.1 531 41.2
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 1.8e-76 290.8 367 45.2
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 3.3e-70 270.0 329 46.2
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 1.2e-67 261.5 322 46.6
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 6.0e-64 249.2 267 50.9
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 7.6e-51 205.7 125 74.4
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 1.3e-42 178.3 195 52.8
RcHm_v2.0_Chr5g0068691 Rosa chinensis HOM05D006184 ORTHO05D049308 1.0e-07 62.4 43 72.1
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 2.6e-06 57.8 25 100.0


User provided reference genes

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