Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 1.5e-175 619.4 304 100.0
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 5.1e-59 232.3 296 42.6
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 4.0e-56 222.6 299 39.8
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 2.0e-55 220.3 288 42.4
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 2.6e-55 219.9 303 41.6
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 4.5e-55 219.2 253 44.3
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 5.8e-55 218.8 301 41.9
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 7.6e-55 218.4 235 44.7
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 2.2e-54 216.9 303 37.6
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 3.8e-54 216.1 243 44.4
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 3.8e-54 216.1 243 44.4
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 3.8e-54 216.1 301 40.9
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 3.8e-54 216.1 249 43.8
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 6.4e-54 215.3 252 41.7
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 8.4e-54 214.9 290 42.8
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 1.4e-53 214.2 256 42.6
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 1.4e-53 214.2 289 41.2
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 1.4e-53 214.2 226 45.6
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 1.4e-53 214.2 307 39.4
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 1.9e-53 213.8 300 40.3
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 3.2e-53 213.0 300 39.3
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 3.2e-53 213.0 291 39.9
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 4.2e-53 212.6 296 40.2
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 4.2e-53 212.6 251 42.2
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.4e-53 212.2 299 39.8
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 7.1e-53 211.8 302 39.1
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 7.1e-53 211.8 253 44.7
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 7.1e-53 211.8 252 43.7
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 7.1e-53 211.8 305 38.4
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 9.3e-53 211.5 278 39.2
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 9.3e-53 211.5 295 39.3
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.6e-52 210.7 299 38.8
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.6e-52 210.7 300 39.3
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 2.1e-52 210.3 298 37.2
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 2.1e-52 210.3 251 39.8
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 3.5e-52 209.5 243 44.0
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 3.5e-52 209.5 287 39.4
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 3.5e-52 209.5 298 38.3
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 4.6e-52 209.1 300 39.0
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 4.6e-52 209.1 300 39.0
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 6.0e-52 208.8 295 37.3
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 6.0e-52 208.8 300 39.3
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 7.9e-52 208.4 299 39.8
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 7.9e-52 208.4 256 41.4
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 1.0e-51 208.0 302 39.4
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.0e-51 208.0 243 42.0
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 1.8e-51 207.2 269 41.3
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.8e-51 207.2 299 39.5
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 1.8e-51 207.2 224 42.0
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 1.8e-51 207.2 255 42.0
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 2.3e-51 206.8 299 37.8
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 2.3e-51 206.8 231 44.6
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 5.1e-51 205.7 299 37.5
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 5.1e-51 205.7 299 37.5
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.1e-51 205.7 298 38.9
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 6.7e-51 205.3 248 40.3
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 6.7e-51 205.3 246 41.9
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 8.7e-51 204.9 300 38.7
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 8.7e-51 204.9 244 42.6
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 8.7e-51 204.9 299 39.8
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 8.7e-51 204.9 251 39.8
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 1.1e-50 204.5 300 38.7
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 1.1e-50 204.5 243 42.0
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 1.5e-50 204.1 256 41.0
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 1.5e-50 204.1 279 39.1
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 1.9e-50 203.8 297 37.0
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 1.9e-50 203.8 299 38.1
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 1.9e-50 203.8 300 38.3
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 4.3e-50 202.6 299 39.5
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 4.3e-50 202.6 299 37.8
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 4.3e-50 202.6 292 41.1
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 4.3e-50 202.6 287 39.7
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 5.6e-50 202.2 218 46.8
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 1.3e-49 201.1 249 41.4
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.6e-49 200.7 295 37.6
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 1.6e-49 200.7 288 39.6
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 1.6e-49 200.7 248 42.7
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 2.8e-49 199.9 302 37.4
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.8e-49 199.9 248 41.9
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 4.8e-49 199.1 260 40.0
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 8.1e-49 198.4 299 37.5
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 8.1e-49 198.4 249 41.0
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 1.1e-48 198.0 251 40.6
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 4.0e-48 196.1 299 37.8
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 6.9e-48 195.3 252 42.1
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 1.5e-47 194.1 235 43.4
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 2.0e-47 193.7 299 37.5
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 2.0e-47 193.7 224 39.3
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 2.0e-47 193.7 250 43.6
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 2.6e-47 193.4 224 42.4
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 3.4e-47 193.0 261 41.0
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 3.4e-47 193.0 287 38.3
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 4.5e-47 192.6 301 37.9
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 7.6e-47 191.8 299 36.1
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 1.0e-46 191.4 299 36.8
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 1.3e-46 191.0 215 45.1
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 1.7e-46 190.7 266 39.5
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 1.9e-45 187.2 262 37.8
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 1.9e-45 187.2 341 33.7
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 3.2e-45 186.4 272 38.6
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 9.3e-45 184.9 255 38.4
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 2.7e-44 183.3 342 33.6
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 3.5e-44 183.0 207 39.6
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 6.7e-43 178.7 236 42.4
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 2.5e-42 176.8 209 43.5
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 3.3e-42 176.4 213 41.3
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 8.2e-41 171.8 189 44.4
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 1.8e-40 170.6 223 39.9
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 5.3e-40 169.1 235 39.1
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 1.5e-39 167.5 287 36.2
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 1.1e-37 161.4 278 36.3
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.3e-35 154.5 276 35.9
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.5e-34 151.0 297 31.0
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 3.7e-33 146.4 153 47.7
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 4.1e-32 142.9 175 44.0
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 2.0e-31 140.6 223 36.3
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 2.0e-31 140.6 216 36.1
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 3.4e-31 139.8 213 38.5
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 2.5e-29 133.7 184 40.2
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 2.5e-29 133.7 153 42.5
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 5.5e-29 132.5 129 46.5
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 8.8e-27 125.2 170 41.8
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.5e-26 124.4 230 35.2
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 1.5e-23 114.4 121 43.0
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 2.6e-23 113.6 291 29.9
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 7.7e-23 112.1 122 45.1
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 1.7e-22 110.9 263 30.0
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 5.0e-22 109.4 109 46.8
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 4.2e-21 106.3 115 43.5
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 2.1e-20 104.0 116 38.8
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 5.1e-19 99.4 180 36.7
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 1.7e-17 94.4 214 30.4
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 2.4e-16 90.5 269 26.8
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 4.5e-15 86.3 213 30.0
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 4.5e-15 86.3 168 31.5
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 4.5e-15 86.3 186 29.0
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.9e-13 80.9 85 44.7


User provided reference genes

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