Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO140G0012 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 4.0e-173 611.3 299 100.0
SMO200G0255 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.5e-119 432.6 316 73.1
SMO083G0001 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.9e-105 384.4 296 70.3
SMO111G0153 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 4.5e-100 368.6 290 69.0
SMO111G0203 Selaginella moellendorffii HOM05D001088 ORTHO05D013615 9.1e-85 317.8 242 71.1
SMO111G0100 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.1e-81 306.6 286 61.5
SMO140G0090 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.2e-73 280.8 229 68.6
SMO160G0005 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.4e-71 271.6 281 56.6
SMO111G0027 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 6.7e-64 248.4 210 65.7
SMO111G0226 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.9e-59 233.0 240 57.1
SMO083G0010 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.6e-57 227.3 231 58.0
SMO111G0113 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.2e-55 221.1 194 64.4
SMO111G0064 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.5e-50 203.4 241 52.3
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 2.6e-47 193.4 302 41.7
SMO140G0066 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 7.8e-44 181.8 232 50.4
SMO215G0003 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 2.0e-39 167.2 207 52.7
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 2.3e-19 100.5 340 28.2
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 6.2e-17 92.4 294 25.9
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 1.4e-16 91.3 322 23.9
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 2.4e-16 90.5 330 23.6
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 6.8e-16 89.0 303 25.4
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 8.9e-16 88.6 329 23.4
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.2e-15 88.2 317 23.3
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 2.0e-15 87.4 322 23.3
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 3.4e-15 86.7 330 23.3
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 3.4e-15 86.7 322 23.6
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 4.4e-15 86.3 317 23.7
SMO140G0060 Selaginella moellendorffii HOM05D003161 ORTHO05D013615 1.7e-14 84.3 44 90.9
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 6.4e-14 82.4 319 23.8
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 2.4e-13 80.5 322 23.3
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 3.2e-13 80.1 312 23.1
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 4.2e-13 79.7 340 22.9
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 7.1e-13 79.0 325 22.5
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 7.1e-13 79.0 298 23.2
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 1.2e-12 78.2 321 22.7
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.6e-12 77.8 319 22.6
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.6e-12 77.8 322 22.4
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 1.6e-12 77.8 241 26.6
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 2.1e-12 77.4 308 22.7
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 2.7e-12 77.0 327 23.2
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 2.7e-12 77.0 322 22.0
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 2.7e-12 77.0 266 23.7
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 3.5e-12 76.6 330 21.2
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 7.8e-12 75.5 320 21.2
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 1.0e-11 75.1 313 22.0
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 1.0e-11 75.1 219 26.0
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 1.3e-11 74.7 330 21.5
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.3e-11 74.7 330 21.2
CAN.G317.9 Capsicum annuum HOM05D003161 ORTHO05D005173 1.7e-11 74.3 318 22.0
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 2.3e-11 73.9 307 23.5
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 2.3e-11 73.9 323 21.7
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 3.0e-11 73.6 186 29.0
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 3.0e-11 73.6 317 23.0
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 3.9e-11 73.2 325 23.7
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 5.1e-11 72.8 322 22.0
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 5.1e-11 72.8 324 21.3
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 5.1e-11 72.8 336 22.0
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 5.1e-11 72.8 313 22.7
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 8.7e-11 72.0 325 20.9
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 8.7e-11 72.0 249 27.3
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 8.7e-11 72.0 323 21.4
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 1.5e-10 71.2 323 21.1
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 1.9e-10 70.9 327 22.6
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 2.5e-10 70.5 134 30.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 2.5e-10 70.5 330 21.5
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.3e-10 70.1 333 21.0
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 3.3e-10 70.1 326 23.0
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 3.3e-10 70.1 324 21.9
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 3.3e-10 70.1 323 21.1
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 5.6e-10 69.3 195 26.7
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 7.3e-10 68.9 307 22.8
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 9.6e-10 68.6 310 21.9
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 9.6e-10 68.6 325 21.8
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 9.6e-10 68.6 325 21.2
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 1.6e-09 67.8 322 21.4
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.1e-09 67.4 160 29.4
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 3.6e-09 66.6 317 23.3
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 3.6e-09 66.6 333 20.1
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 4.8e-09 66.2 205 25.9
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 6.2e-09 65.9 143 29.4
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 6.2e-09 65.9 305 22.6
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 6.2e-09 65.9 307 23.5
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 8.1e-09 65.5 185 27.6
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 1.4e-08 64.7 331 20.2
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 3.1e-08 63.5 224 25.4
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 3.1e-08 63.5 224 25.4
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.1e-08 63.5 176 29.5
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 4.0e-08 63.2 331 20.2
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-08 63.2 176 29.5
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.0e-08 63.2 228 27.2
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 5.3e-08 62.8 325 20.9
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 6.9e-08 62.4 185 27.6
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 6.9e-08 62.4 176 29.0
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 6.9e-08 62.4 160 28.8
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 9.0e-08 62.0 228 26.8
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 1.2e-07 61.6 232 25.9
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 1.2e-07 61.6 81 38.3
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.5e-07 61.2 193 24.4
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 2.0e-07 60.8 329 20.7
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.6e-07 60.5 188 26.1
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 2.6e-07 60.5 327 20.2
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 3.4e-07 60.1 180 26.7
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 3.4e-07 60.1 321 19.3
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 4.4e-07 59.7 189 27.5
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 5.8e-07 59.3 283 23.7
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 5.8e-07 59.3 69 42.0
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 9.9e-07 58.5 180 25.6
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.3e-06 58.2 79 41.8
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 3.8e-06 56.6 87 36.8
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 3.8e-06 56.6 185 23.8
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 6.4e-06 55.8 221 24.4
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 6.4e-06 55.8 81 33.3
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 8.4e-06 55.5 189 25.4
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 8.4e-06 55.5 81 33.3


User provided reference genes

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