Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO137G0368 Selaginella moellendorffii HOM05D027672 ORTHO05D005204 5.6e-175 617.5 302 100.0
SMO117G0047 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 2.1e-49 200.3 132 76.5
SMO202G0076 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 6.0e-44 182.2 174 61.5
SMO137G0190 Selaginella moellendorffii HOM05D027672 ORTHO05D379191 2.6e-31 140.2 134 60.4
SMO172G0097 Selaginella moellendorffii HOM05D027672 ORTHO05D379152 7.1e-29 132.1 109 65.1
SMO302G0053 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 1.1e-26 124.8 112 66.1
SMO364G0410 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 1.6e-25 120.9 138 42.8
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 3.5e-20 103.2 127 37.0
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 3.5e-20 103.2 126 38.1
HPP92_027283 Vanilla planifolia HOM05D004178 ORTHO05D005204 3.5e-20 103.2 125 37.6
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 1.0e-19 101.7 123 38.2
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 1.3e-19 101.3 125 39.2
SMO164G0205 Selaginella moellendorffii HOM05D004178 ORTHO05D005204 1.8e-19 100.9 126 51.6
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 3.0e-19 100.1 123 37.4
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 3.0e-19 100.1 126 37.3
Potri.003G107700 Populus trichocarpa HOM05D004178 ORTHO05D005204 3.0e-19 100.1 126 36.5
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 3.9e-19 99.8 123 36.6
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 6.7e-19 99.0 121 38.8
Oeu021706.1 Olea europaea HOM05D004178 ORTHO05D005204 6.7e-19 99.0 122 40.2
Zm00001eb309160 Zea mays HOM05D004178 ORTHO05D005204 6.7e-19 99.0 132 35.6
Atru.chr1.752 Acer truncatum HOM05D004178 ORTHO05D005204 8.7e-19 98.6 126 37.3
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 8.7e-19 98.6 123 35.0
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 1.1e-18 98.2 122 36.9
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 1.1e-18 98.2 122 36.9
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 1.1e-18 98.2 123 35.8
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 1.1e-18 98.2 123 36.6
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 1.5e-18 97.8 126 35.7
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 1.5e-18 97.8 126 36.5
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 1.5e-18 97.8 122 36.9
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 1.9e-18 97.4 122 35.2
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 1.9e-18 97.4 123 36.6
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 1.9e-18 97.4 123 34.1
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 1.9e-18 97.4 123 39.0
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 1.9e-18 97.4 123 39.0
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 1.9e-18 97.4 123 35.8
Gohir.D12G200300 Gossypium hirsutum HOM05D004178 ORTHO05D005204 2.5e-18 97.1 123 35.8
Gorai.008G215500 Gossypium raimondii HOM05D004178 ORTHO05D005204 2.5e-18 97.1 123 35.8
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 2.5e-18 97.1 126 36.5
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 2.5e-18 97.1 123 38.2
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 3.3e-18 96.7 129 35.7
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 3.3e-18 96.7 132 34.1
Ca_30729_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 3.3e-18 96.7 126 36.5
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 3.3e-18 96.7 123 36.6
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 4.3e-18 96.3 123 36.6
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 4.3e-18 96.3 126 35.7
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 4.3e-18 96.3 123 34.1
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 5.7e-18 95.9 123 38.2
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 5.7e-18 95.9 123 35.8
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 5.7e-18 95.9 123 35.8
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 5.7e-18 95.9 123 35.0
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 7.4e-18 95.5 123 35.0
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 7.4e-18 95.5 126 34.9
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.4e-18 95.5 128 35.2
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.4e-18 95.5 126 34.9
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.4e-18 95.5 126 34.9
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.4e-18 95.5 128 35.2
Gohir.A12G197800 Gossypium hirsutum HOM05D004178 ORTHO05D005204 7.4e-18 95.5 123 35.8
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 9.6e-18 95.1 121 35.5
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 9.6e-18 95.1 123 35.0
PGSC0003DMG400014287 Solanum tuberosum HOM05D004178 ORTHO05D005204 9.6e-18 95.1 123 38.2
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 1.3e-17 94.7 127 37.8
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 1.3e-17 94.7 122 35.2
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 1.3e-17 94.7 123 34.1
AL6G18000 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.6e-17 94.4 123 34.1
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 1.6e-17 94.4 123 32.5
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 1.6e-17 94.4 126 34.1
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 1.6e-17 94.4 123 38.2
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 34.1
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 2.1e-17 94.0 113 38.9
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 2.1e-17 94.0 123 32.5
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 2.8e-17 93.6 123 36.6
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 2.8e-17 93.6 123 35.0
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 2.8e-17 93.6 122 35.2
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 3.7e-17 93.2 123 32.5
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 3.7e-17 93.2 123 32.5
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 4.8e-17 92.8 123 32.5
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 4.8e-17 92.8 123 37.4
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 4.8e-17 92.8 121 36.4
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 6.3e-17 92.4 122 35.2
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 8.2e-17 92.0 121 33.9
CAN.G515.9 Capsicum annuum HOM05D004178 ORTHO05D005204 8.2e-17 92.0 123 38.2
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 8.2e-17 92.0 123 32.5
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 1.1e-16 91.7 121 34.7
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 1.4e-16 91.3 123 32.5
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 1.4e-16 91.3 122 34.4
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 1.4e-16 91.3 123 36.6
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 1.4e-16 91.3 123 31.7
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 1.8e-16 90.9 123 33.3
Cpa.g.sc1936.1 Carica papaya HOM05D004178 ORTHO05D005204 1.8e-16 90.9 113 35.4
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 3.1e-16 90.1 123 32.5
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 4.1e-16 89.7 123 32.5
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 4.1e-16 89.7 123 33.3
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 6.9e-16 89.0 121 36.4
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 6.9e-16 89.0 123 32.5
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 1.2e-15 88.2 123 33.3
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 1.5e-15 87.8 123 34.1
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 1.5e-15 87.8 123 34.1
AagrBONN_evm.TU.Sc2ySwM_228.971 Anthoceros agrestis HOM05D004178 ORTHO05D005204 2.0e-15 87.4 123 33.3
Pp3c11_11190 Physcomitrium patens HOM05D004178 ORTHO05D005204 4.5e-15 86.3 121 33.9
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 1.3e-14 84.7 122 33.6
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 2.9e-14 83.6 126 33.3
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 2.9e-14 83.6 123 34.1
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 3.8e-14 83.2 122 34.4
Mapoly0003s0057 Marchantia polymorpha HOM05D004178 ORTHO05D005204 3.8e-14 83.2 121 30.6
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 8.4e-14 82.0 123 33.3
AL1G57860 Arabidopsis lyrata HOM05D004178 ORTHO05D005039 9.3e-13 78.6 110 33.6
SHI13977 Sapria himalayana HOM05D004178 ORTHO05D005204 9.3e-13 78.6 113 36.3
Psat3g047440 Pisum sativum HOM05D004178 ORTHO05D005204 1.2e-12 78.2 107 36.4
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 2.7e-12 77.0 122 32.0
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 6.1e-12 75.9 124 31.5
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 1.0e-11 75.1 115 32.2
AUR62002220 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.3e-11 74.7 121 31.4
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.3e-11 74.7 121 31.4
Glyma.12G006400 Glycine max HOM05D004178 ORTHO05D005204 1.1e-10 71.6 53 54.7
Ah.02g120680 Amaranthus hybridus HOM05D004178 ORTHO05D005204 1.9e-10 70.9 94 39.4
BolC2t06288H Brassica oleracea HOM05D004178 ORTHO05D005204 4.3e-10 69.7 86 44.2
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 6.3e-09 65.9 104 31.7
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 1.1e-08 65.1 103 33.0
AUR62042657 Chenopodium quinoa HOM05D004178 ORTHO05D005204 3.4e-07 60.1 130 30.8
BcaC03g13191 Brassica carinata HOM05D004178 ORTHO05D005204 7.7e-07 58.9 115 32.2
Ca_02789_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 2.2e-06 57.4 39 61.5
CBR_g34600 Chara braunii HOM05D000019 ORTHO05D000048 8.5e-06 55.5 52 44.2


User provided reference genes

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