Gene: Cc02_g04400

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc02_g04400
  • Transcript Identifier Cc02_g04400.1
  • Gene Type Coding gene
  • Location chr2 : 3469890-3489998 : negative

Gene Family Information

  • ID HOM05D004178
  • #Genes/#Species 169/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB B9H073
  • UniProtKB D7U753
  • UniProtKB B9R9U6
  • UniProtKB Q6P9I7
  • UniProtKB Q924W5
  • UniProtKB Q96SB8
  • id GSCOCG00020352001

Descriptions

  • Description Putative Structural maintenance of chromosomes protein 6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:0006281
IEA
InterProDNA repair
GO:0051276
IEA
InterProchromosome organization
GO:0007062
ISO
PLAZA Integrative Orthologysister chromatid cohesion AT5G07660
GO:0010165
ISO
PLAZA Integrative Orthologyresponse to X-ray AT5G07660
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G61460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030915
IEA
InterProSmc5-Smc6 complex
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR027132 Structural maintenance of chromosomes protein 6
IPR003395 RecF/RecN/SMC, N-terminal
IPR036277 SMCs flexible hinge superfamily
Mapman id Description
14.3.6.1.2 DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.component SMC6