Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 0.0e+00 1085.5 627 100.0
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 3.8e-194 682.2 627 57.6
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 3.2e-193 679.1 649 58.4
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 7.2e-193 677.9 630 56.8
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 1.8e-191 673.3 651 56.7
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 4.0e-191 672.2 653 56.0
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 8.8e-191 671.0 637 57.1
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 3.4e-190 669.1 653 56.4
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 9.8e-190 667.5 634 59.3
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 2.8e-189 666.0 650 56.5
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 1.1e-188 664.1 665 53.5
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 2.4e-188 662.9 656 54.4
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 3.1e-188 662.5 687 53.0
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 9.1e-188 661.0 634 64.8
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 5.9e-187 658.3 634 56.5
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 7.7e-187 657.9 653 57.4
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 1.3e-186 657.1 652 57.1
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 1.7e-186 656.8 645 56.1
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 3.8e-186 655.6 631 54.4
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 5.0e-186 655.2 635 56.1
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 6.6e-186 654.8 646 55.4
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 1.1e-185 654.1 641 56.6
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 1.9e-185 653.3 653 54.8
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 3.3e-185 652.5 644 55.4
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 5.5e-185 651.7 643 54.9
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 5.5e-185 651.7 623 56.5
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 1.6e-184 650.2 633 54.7
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 2.8e-184 649.4 651 54.5
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 1.0e-183 647.5 675 53.6
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 1.4e-183 647.1 635 55.6
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 3.0e-183 646.0 603 57.4
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 3.0e-183 646.0 632 55.1
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 4.0e-183 645.6 641 54.3
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 8.9e-183 644.4 643 56.3
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 8.9e-183 644.4 631 55.8
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 1.5e-182 643.7 639 55.4
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 4.4e-182 642.1 682 52.6
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 4.4e-182 642.1 641 58.2
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 4.4e-182 642.1 664 53.8
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 7.5e-182 641.3 632 53.6
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 9.8e-182 641.0 657 55.6
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 9.8e-182 641.0 629 54.7
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 9.8e-182 641.0 629 54.7
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 9.8e-182 641.0 635 54.2
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 1.7e-181 640.2 635 54.6
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 1.7e-181 640.2 649 57.3
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 2.2e-181 639.8 665 53.4
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 2.9e-181 639.4 482 64.3
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 2.9e-181 639.4 674 52.2
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 3.7e-181 639.0 626 54.6
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 4.9e-181 638.6 487 64.9
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 1.1e-180 637.5 654 54.6
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 1.4e-180 637.1 646 55.3
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 3.2e-180 636.0 623 56.0
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 5.4e-180 635.2 485 67.6
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 5.4e-180 635.2 631 54.8
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 5.4e-180 635.2 621 55.4
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 9.2e-180 634.4 483 63.6
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 2.0e-179 633.3 616 55.8
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 4.6e-179 632.1 644 54.5
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 7.8e-179 631.3 650 56.3
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 1.3e-178 630.6 663 55.1
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 1.7e-178 630.2 648 54.5
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 1.7e-178 630.2 621 53.5
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 2.3e-178 629.8 666 52.0
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 2.3e-178 629.8 643 62.4
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 2.3e-178 629.8 622 54.0
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 2.9e-178 629.4 622 54.8
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 6.6e-178 628.2 633 54.7
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 6.6e-178 628.2 628 54.1
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 1.1e-177 627.5 611 54.3
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 4.3e-177 625.5 648 53.5
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 4.3e-177 625.5 634 55.0
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 2.1e-176 623.2 655 52.7
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 1.4e-175 620.5 624 53.7
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 1.4e-175 620.5 624 53.7
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.8e-175 620.2 656 51.8
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 2.3e-175 619.8 658 52.0
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 2.3e-175 619.8 620 54.0
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 4.0e-175 619.0 649 52.4
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 3.4e-174 615.9 486 62.3
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 1.3e-173 614.0 638 53.0
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 1.3e-173 614.0 673 52.9
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 1.7e-173 613.6 638 52.8
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 3.7e-173 612.5 649 53.5
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 8.3e-173 611.3 486 62.8
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 1.1e-172 610.9 737 48.8
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 4.1e-172 609.0 645 52.7
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 9.2e-172 607.8 642 53.0
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 2.0e-171 606.7 456 65.1
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 6.0e-171 605.1 686 50.7
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 7.8e-171 604.7 632 54.7
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 6.2e-168 595.1 619 51.1
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 3.4e-166 589.3 500 58.6
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 1.6e-160 570.5 646 50.8
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 3.6e-160 569.3 628 49.2
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 6.2e-160 568.5 626 51.0
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 4.0e-159 565.8 445 62.5
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 4.1e-156 555.8 482 60.2
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 4.9e-141 505.8 546 51.8
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 9.0e-119 431.8 627 41.6
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 3.2e-108 396.7 546 43.6
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 3.9e-106 389.8 668 38.9
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 2.4e-103 380.6 555 43.1
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 2.0e-94 350.9 499 40.3
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 3.5e-94 350.1 458 46.3
unitig_22.g6309 Utricularia gibba HOM05D006183 ORTHO05D007844 2.4e-79 300.8 385 46.8
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 2.5e-76 290.8 244 58.6
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 2.5e-76 290.8 244 58.6
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 2.5e-76 290.8 244 58.6
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 3.2e-76 290.4 367 46.6
AagrBONN_evm.TU.Sc2ySwM_117.1688 Anthoceros agrestis HOM05D006183 ORTHO05D007844 6.8e-74 282.7 323 50.5
PRCOL_00006356 Prasinoderma coloniale HOM05D006183 ORTHO05D007844 8.3e-48 196.1 536 28.5
Cfa024676 Carpinus fangiana HOM05D006183 ORTHO05D007844 8.1e-43 179.5 488 28.5
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 1.2e-41 175.6 341 35.8
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 9.9e-41 172.6 107 72.0
AagrBONN_evm.TU.Sc2ySwM_117.1686 Anthoceros agrestis HOM05D006183 ORTHO05D007844 2.1e-38 164.9 106 75.5
RcHm_v2.0_Chr6g0286201 Rosa chinensis HOM05D006183 ORTHO05D007844 1.2e-22 112.5 116 50.9
Dinv36951 Davidia involucrata HOM05D006183 ORTHO05D007844 6.2e-11 73.6 57 63.2
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 5.3e-10 70.5 40 72.5
BcaB07g31601 Brassica carinata HOM05D006183 ORTHO05D007844 4.9e-08 63.9 44 68.2
Sabra16G0131600 Salix brachista HOM05D004768 ORTHO05D000138 4.6e-06 57.4 174 26.4


User provided reference genes

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