Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47216 Sapria himalayana HOM05D004977 ORTHO05D006454 1.2e-128 463.4 279 100.0
Manes.04G055000 Manihot esculenta HOM05D004977 ORTHO05D006454 5.2e-66 255.4 284 61.6
Potri.001G213900 Populus trichocarpa HOM05D004977 ORTHO05D006454 5.9e-62 241.9 275 60.0
TWI31G0709 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 1.3e-61 240.7 278 55.8
Phvul.011G100500 Phaseolus vulgaris HOM05D004977 ORTHO05D006454 5.0e-61 238.8 249 60.6
Duzib114G0826 Durio zibethinus HOM05D004977 ORTHO05D006454 1.2e-59 234.2 244 58.6
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 1.2e-59 234.2 261 55.9
MD05G1047200 Malus domestica HOM05D004977 ORTHO05D006454 2.1e-59 233.4 243 59.3
VMungo1127G1403 Vigna mungo HOM05D004977 ORTHO05D006454 6.1e-59 231.9 248 59.3
MD07G1072700 Malus domestica HOM05D004977 ORTHO05D006454 8.0e-59 231.5 243 59.3
Prupe.8G068000 Prunus persica HOM05D004977 ORTHO05D006454 1.0e-58 231.1 243 56.0
TWI79G0798 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 2.3e-58 229.9 276 55.4
Nn6g34596 Nelumbo nucifera HOM05D004977 ORTHO05D006454 6.7e-58 228.4 250 57.6
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 1.5e-57 227.3 246 58.1
Lj3g0003647 Lotus japonicus HOM05D004977 ORTHO05D006454 2.0e-57 226.9 268 55.2
MD02G1244300 Malus domestica HOM05D004977 ORTHO05D006454 2.0e-57 226.9 243 59.3
Thhalv10012587m.g Eutrema salsugineum HOM05D004977 ORTHO05D006454 4.4e-57 225.7 280 54.6
Psat7g203480 Pisum sativum HOM05D004977 ORTHO05D006454 5.7e-57 225.3 268 55.6
TAR633G0771 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.3e-56 224.2 277 54.9
Actinidia04910 Actinidia chinensis HOM05D004977 ORTHO05D006454 3.7e-56 222.6 318 48.1
Eucgr.J00591 Eucalyptus grandis HOM05D004977 ORTHO05D006454 1.1e-55 221.1 246 61.8
Oeu058189.1 Olea europaea HOM05D004977 ORTHO05D006454 1.8e-55 220.3 291 51.9
Cc01_g07900 Coffea canephora HOM05D004977 ORTHO05D006454 3.1e-55 219.5 293 49.8
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 3.1e-55 219.5 286 51.0
Glyma.12G096100 Glycine max HOM05D004977 ORTHO05D006454 3.1e-55 219.5 248 57.7
Gohir.D04G019200 Gossypium hirsutum HOM05D004977 ORTHO05D006454 3.1e-55 219.5 290 49.0
Gorai.012G023000 Gossypium raimondii HOM05D004977 ORTHO05D006454 3.1e-55 219.5 290 49.0
Medtr4g050180 Medicago truncatula HOM05D004977 ORTHO05D006454 3.1e-55 219.5 321 49.2
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 4.1e-55 219.2 285 52.3
Haze_23597 Corylus avellana HOM05D004977 ORTHO05D006454 1.6e-54 217.2 244 57.4
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 2.0e-54 216.9 286 54.2
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 2.0e-54 216.9 292 50.3
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 2.7e-54 216.5 292 50.7
Aqoxy1G00589 Aquilegia oxysepala HOM05D004977 ORTHO05D006454 3.5e-54 216.1 274 56.9
BNapus_Darmor_BZH_scaffold_38p00910 Brassica napus HOM05D004977 ORTHO05D006454 4.5e-54 215.7 254 57.5
QL01p019105 Quercus lobata HOM05D004977 ORTHO05D006454 7.7e-54 214.9 276 55.4
Gohir.A05G395800 Gossypium hirsutum HOM05D004977 ORTHO05D006454 1.0e-53 214.5 321 50.2
Glyma.06G308700 Glycine max HOM05D004977 ORTHO05D006454 2.9e-53 213.0 248 53.6
GSVIVG01037357001 Vitis vinifera HOM05D004977 ORTHO05D006454 3.8e-53 212.6 277 52.7
QL01p019084 Quercus lobata HOM05D004977 ORTHO05D006454 5.0e-53 212.2 319 53.3
BcaC03g13854 Brassica carinata HOM05D004977 ORTHO05D006454 6.5e-53 211.8 255 56.5
BolC2t07133H Brassica oleracea HOM05D004977 ORTHO05D006454 6.5e-53 211.8 255 56.5
CSS0048805 Camellia sinensis var. sinensis HOM05D004977 ORTHO05D006454 8.5e-53 211.5 292 51.7
SGA_v2.0_scaffold7G04011 Striga asiatica HOM05D004977 ORTHO05D006454 4.2e-52 209.1 288 48.6
Carub.0006s1965 Capsella rubella HOM05D004977 ORTHO05D006454 5.5e-52 208.8 252 62.3
COL.COLO4_16322 Corchorus olitorius HOM05D004977 ORTHO05D006454 5.5e-52 208.8 245 54.3
MSTRG.21003 Avicennia marina HOM05D004977 ORTHO05D006454 1.2e-51 207.6 288 48.6
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 1.2e-51 207.6 291 50.5
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 1.2e-51 207.6 289 49.1
Migut.D02372 Erythranthe guttata HOM05D004977 ORTHO05D006454 1.6e-51 207.2 317 48.6
BcaB05g22754 Brassica carinata HOM05D004977 ORTHO05D006454 2.1e-51 206.8 250 54.0
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 2.1e-51 206.8 243 56.8
CiPaw.13G126500 Carya illinoinensis HOM05D004977 ORTHO05D006454 3.6e-51 206.1 243 59.3
ClCG02G022520 Citrullus lanatus HOM05D004977 ORTHO05D006454 3.6e-51 206.1 284 51.8
RcHm_v2.0_Chr5g0051061 Rosa chinensis HOM05D004977 ORTHO05D006454 6.1e-51 205.3 276 51.4
Sed0002287 Sechium edule HOM05D004977 ORTHO05D006454 8.0e-51 204.9 287 49.5
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 8.0e-51 204.9 291 47.1
Peaxi162Scf00401g00211 Petunia axillaris HOM05D004977 ORTHO05D006454 1.8e-50 203.8 291 47.8
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 3.0e-50 203.0 273 54.2
CARHR191520 Cardamine hirsuta HOM05D004977 ORTHO05D006454 5.2e-50 202.2 293 48.1
PGR044G2329 Punica granatum HOM05D004977 ORTHO05D006454 5.2e-50 202.2 243 58.4
Thecc.10G121800 Theobroma cacao HOM05D004977 ORTHO05D006454 5.2e-50 202.2 254 50.8
Cpa.g.sc103.53 Carica papaya HOM05D004977 ORTHO05D006454 6.8e-50 201.8 276 55.4
unitig_699.g19732 Utricularia gibba HOM05D004977 ORTHO05D006454 6.8e-50 201.8 277 49.8
Dinv18862 Davidia involucrata HOM05D004977 ORTHO05D006454 1.7e-48 197.2 200 63.0
AL6G32970 Arabidopsis lyrata HOM05D004977 ORTHO05D006454 2.2e-48 196.8 250 59.6
PSO384G3330 Papaver somniferum HOM05D004977 ORTHO05D006454 2.2e-48 196.8 264 59.5
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 2.8e-48 196.4 243 55.1
Sp6g23180 Schrenkiella parvula HOM05D004977 ORTHO05D006454 4.8e-48 195.7 228 57.0
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 4.8e-48 195.7 270 53.3
FAN16G1264 Fragaria x ananassa HOM05D004977 ORTHO05D006454 6.3e-48 195.3 243 55.1
THA.LOC104810945 Tarenaya hassleriana HOM05D004977 ORTHO05D006454 6.3e-48 195.3 272 50.4
MSTRG.21010 Avicennia marina HOM05D004977 ORTHO05D006454 8.3e-48 194.9 285 47.4
Ciclev10027762m.g Citrus clementina HOM05D004977 ORTHO05D006454 1.4e-47 194.1 266 53.0
AUR62003055 Chenopodium quinoa HOM05D004977 ORTHO05D006454 1.8e-47 193.7 268 50.0
TPR.G4657 Trifolium pratense HOM05D004977 ORTHO05D006454 3.1e-47 193.0 323 42.7
Ah.02g126710 Amaranthus hybridus HOM05D001549 ORTHO05D003098 5.4e-47 192.2 249 51.8
PSO339G5000 Papaver somniferum HOM05D004977 ORTHO05D006454 7.0e-47 191.8 264 57.2
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.6e-46 190.7 243 54.3
vmacro04053 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 2.0e-46 190.3 298 50.7
AT5G22010 Arabidopsis thaliana HOM05D004977 ORTHO05D006454 4.5e-46 189.1 250 57.6
AUR62007869 Chenopodium quinoa HOM05D004977 ORTHO05D006454 7.7e-46 188.3 168 66.7
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 1.0e-45 188.0 285 47.0
Migut.D02375 Erythranthe guttata HOM05D004977 ORTHO05D006454 1.3e-45 187.6 130 79.2
DCAR_018210 Daucus carota HOM05D004977 ORTHO05D006454 2.3e-45 186.8 103 87.4
ECA234G1388 Erigeron canadensis HOM05D004977 ORTHO05D006454 2.9e-45 186.4 199 57.8
Sabra04G0149200 Salix brachista HOM05D004977 ORTHO05D006454 5.5e-44 182.2 307 48.5
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 9.5e-44 181.4 138 69.6
FAN25G0235 Fragaria x ananassa HOM05D004977 ORTHO05D006454 9.5e-44 181.4 161 67.7
CDE05G0645 Ceratophyllum demersum HOM05D004977 ORTHO05D006454 1.2e-43 181.0 260 47.3
Dinv21726 Davidia involucrata HOM05D004977 ORTHO05D006454 1.6e-43 180.6 266 48.1
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 1.6e-43 180.6 261 49.4
Lj2A831T23 Lonicera japonica HOM05D004977 ORTHO05D006454 4.7e-43 179.1 175 66.9
SalBow6G4955 Salvia bowleyana HOM05D004977 ORTHO05D006454 6.1e-43 178.7 322 43.5
Lsat_1_v5_gn_4_27921 Lactuca sativa HOM05D004977 ORTHO05D006454 1.0e-42 177.9 299 49.2
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 8.8e-42 174.9 267 46.1
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 1.5e-41 174.1 102 84.3
arahy.Tifrunner.gnm1.ann1.78MUYP Arachis hypogaea HOM05D004977 ORTHO05D006454 1.3e-40 171.0 265 47.5
Zm00001eb114240 Zea mays HOM05D004977 ORTHO05D006454 1.4e-39 167.5 257 54.9
ATR0697G081 Amborella trichopoda HOM05D004977 ORTHO05D006454 8.6e-37 158.3 287 46.3
arahy.Tifrunner.gnm1.ann1.7R5ZBL Arachis hypogaea HOM05D004977 ORTHO05D006454 4.3e-36 156.0 85 90.6
Ca_19486_v3 Cicer arietinum L. HOM05D004977 ORTHO05D006454 9.5e-36 154.8 108 74.1
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 6.1e-35 152.1 98 75.5
BolC8t51866H Brassica oleracea HOM05D004977 ORTHO05D006454 1.4e-34 151.0 270 42.6
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 3.0e-34 149.8 105 75.2
BraA02t05635Z Brassica rapa HOM05D004977 ORTHO05D006454 1.2e-33 147.9 274 44.5
CBR_g36402 Chara braunii HOM05D004977 ORTHO05D006454 3.7e-32 142.9 144 57.6
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 1.8e-31 140.6 103 68.0
AagrBONN_evm.TU.Sc2ySwM_228.4379 Anthoceros agrestis HOM05D004977 ORTHO05D006454 4.3e-28 129.4 88 73.9
Actinidia37641 Actinidia chinensis HOM05D004977 ORTHO05D006454 1.7e-24 117.5 312 37.2
C08p43100 Brassica napus HOM05D004977 ORTHO05D006454 5.4e-23 112.5 148 50.0
MCO16G356 Micromonas commoda HOM05D004977 ORTHO05D006454 7.8e-22 108.6 97 55.7
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 6.6e-21 105.5 92 57.6
Atru.chr7.2567 Acer truncatum HOM05D004977 ORTHO05D006454 4.3e-20 102.8 103 62.1
TAR369G0311 Trochodendron aralioides HOM05D004977 ORTHO05D006454 4.3e-20 102.8 134 48.5
vmacro14316 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 1.2e-19 101.3 226 41.2
EL10Ac6g14670 Beta vulgaris HOM05D004977 ORTHO05D006454 7.5e-17 92.0 243 39.9
TAR369G0757 Trochodendron aralioides HOM05D004977 ORTHO05D000293 1.6e-14 84.3 120 46.7
Cfa025270 Carpinus fangiana HOM05D004977 ORTHO05D006454 1.5e-12 77.8 89 41.6
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 2.6e-09 67.0 78 46.2
PRCOL_00006813 Prasinoderma coloniale HOM05D004977 ORTHO05D006454 1.3e-08 64.7 134 35.8
CBR_g23346 Chara braunii HOM05D020685 ORTHO05D022318 1.7e-08 64.3 91 37.4


User provided reference genes

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