Gene: CBR_g31434
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g31434
- Transcript Identifier GBG80878
- Gene Type Coding gene
- Location BFEA01000359 : 166263-192287 : positive
Gene Family Information
- ID HOM05D004977
- #Genes/#Species 149/95
- Phylogenetic origin
- ID ORTHO05D006454
- #Genes/#Species 142/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid GBG80878
- uniprot A0A388LEZ9
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000003 | ISO | PLAZA Integrative Orthology | reproduction | AT5G22010 |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT5G22010 |
| GO:0000712 | ISO | PLAZA Integrative Orthology | resolution of meiotic recombination intermediates | AT5G22010 |
| GO:0051570 | ISO | PLAZA Integrative Orthology | regulation of histone H3-K9 methylation | AT5G22010 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G22010 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT5G22010 |
| GO:0006281 | ISO | PLAZA Homology (enrichment) | DNA repair | HOM05D004977 |
| GO:0031935 | ISO | PLAZA Integrative Orthology | regulation of chromatin silencing | AT5G22010 |
| GO:0006366 | IEA | GOA Database | transcription by RNA polymerase II | |
| GO:0006366 | IEA | InterPro | transcription by RNA polymerase II | |
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003689 | IEA | GOA Database | DNA clamp loader activity | |
| GO:0003689 | IEA | InterPro | DNA clamp loader activity | |
| GO:0046982 | IEA | GOA Database | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005663 | IEA | GOA Database | DNA replication factor C complex | |
| GO:0005663 | IEA | InterPro | DNA replication factor C complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR003195 | Transcription initiation factor IID, subunit 13 |
| IPR036420 | BRCT domain superfamily |
| IPR013725 | DNA replication factor RFC1, C-terminal |
| IPR003959 | ATPase, AAA-type, core |
| IPR001357 | BRCT domain |
| IPR009072 | Histone-fold |
| IPR008921 | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal |
| Mapman id | Description |
|---|---|
| 13.2.3.4.2.1 | Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC1 |
| 15.3.4.2.8 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component SPT3/TAF13 |
| 15.3.4.3.3.5 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component SPT3/TAF13 |