Gene: Pp3c22_21030

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c22_21030
  • Transcript Identifier Pp3c22_21030V3.1
  • Gene Type Coding gene
  • Location Chr22 : 14088147-14096096 : positive

Gene Family Information

  • ID HOM05D004977
  • #Genes/#Species 149/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c22_21030V3.1
  • pacid 32905160
  • alias Phpat.022G072800
  • alias Pp1s225_68V6
  • alias Phypa_145270
  • uniprot A0A2K1IP65

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000712
IEA
GOA Databaseresolution of meiotic recombination intermediates
GO:0000003
IEA
GOA Databasereproduction
GO:0031935
IEA
GOA Databaseregulation of chromatin silencing
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0051570
IEA
GOA Databaseregulation of histone H3-K9 methylation
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003689
IEA
GOA DatabaseDNA clamp loader activity
GO:0003689
IEA
InterProDNA clamp loader activity
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005663
IEA
GOA DatabaseDNA replication factor C complex
GO:0005663
IEA
InterProDNA replication factor C complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR036420 BRCT domain superfamily
IPR001357 BRCT domain
IPR003959 ATPase, AAA-type, core
IPR013725 DNA replication factor RFC1, C-terminal
IPR003593 AAA+ ATPase domain
IPR012178 Replication factor C subunit 1
Mapman id Description
13.2.3.4.2.1 Cell cycle organisation.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.component RFC1