Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38391 Sapria himalayana HOM05D000917 ORTHO05D000764 1.6e-61 239.2 119 100.0
SHI38451 Sapria himalayana HOM05D000917 ORTHO05D000764 1.6e-61 239.2 119 100.0
SHI16220 Sapria himalayana HOM05D000917 ORTHO05D000764 6.7e-39 164.1 136 65.4
SHI29333 Sapria himalayana HOM05D000917 ORTHO05D000764 8.7e-39 163.7 122 73.0
SHI29339 Sapria himalayana HOM05D000917 ORTHO05D000764 7.6e-35 150.6 100 79.0
SHI21916 Sapria himalayana HOM05D000917 ORTHO05D000764 1.0e-34 150.2 152 57.2
SHI30990 Sapria himalayana HOM05D000917 ORTHO05D000764 4.9e-34 147.9 138 58.7
GSVIVG01036052001 Vitis vinifera HOM05D000917 ORTHO05D000764 5.5e-33 144.4 163 52.1
SHI36247 Sapria himalayana HOM05D000917 ORTHO05D367406 1.8e-31 139.4 92 78.3
SHI40689 Sapria himalayana HOM05D000917 ORTHO05D000764 1.9e-30 136.0 105 68.6
SHI08163 Sapria himalayana HOM05D000917 ORTHO05D000764 7.4e-30 134.0 116 65.5
SHI35009 Sapria himalayana HOM05D000917 ORTHO05D000764 3.7e-29 131.7 112 67.9
SHI10673 Sapria himalayana HOM05D000917 ORTHO05D000764 4.8e-29 131.3 114 64.9
SHI18419 Sapria himalayana HOM05D000917 ORTHO05D000764 6.2e-29 131.0 96 72.9
SHI33511 Sapria himalayana HOM05D000917 ORTHO05D000764 1.0e-26 123.6 78 80.8
SHI12135 Sapria himalayana HOM05D000917 ORTHO05D000764 1.7e-26 122.9 141 53.9
SHI15835 Sapria himalayana HOM05D000917 ORTHO05D000764 1.9e-22 109.4 112 57.1
SHI29846 Sapria himalayana HOM05D000917 ORTHO05D368954 1.0e-15 87.0 58 75.9
SHI42885 Sapria himalayana HOM05D000917 ORTHO05D000764 1.0e-15 87.0 52 80.8
SHI45543 Sapria himalayana HOM05D000917 ORTHO05D000764 1.4e-15 86.7 52 80.8
Dinv08134 Davidia involucrata HOM05D000917 ORTHO05D000764 1.8e-15 86.3 139 41.0
SHI40045 Sapria himalayana HOM05D000917 ORTHO05D364021 2.3e-15 85.9 119 48.7
SHI42768 Sapria himalayana HOM05D000917 ORTHO05D000764 1.1e-14 83.6 119 47.9
TAR623G1649 Trochodendron aralioides HOM05D000917 ORTHO05D000764 1.1e-14 83.6 112 47.3
SHI31759 Sapria himalayana HOM05D000917 ORTHO05D000764 9.7e-14 80.5 62 64.5
SHI43519 Sapria himalayana HOM05D000917 ORTHO05D000764 2.2e-13 79.3 52 76.9
CSS0005383 Camellia sinensis var. sinensis HOM05D000917 ORTHO05D000764 1.4e-12 76.6 108 44.4
CSS0021338 Camellia sinensis var. sinensis HOM05D000917 ORTHO05D000764 1.8e-12 76.3 108 44.4
Cc01_g08590 Coffea canephora HOM05D000917 ORTHO05D000764 9.1e-12 73.9 127 38.6
SHI23600 Sapria himalayana HOM05D036795 ORTHO05D363809 2.6e-11 72.4 117 44.4
MBI17_g25806_MAGBIO Magnolia biondii HOM05D000917 ORTHO05D000764 3.4e-11 72.0 102 43.1
Lsat_1_v5_gn_3_126020 Lactuca sativa HOM05D000917 ORTHO05D000764 7.7e-11 70.9 115 38.3
Cfa009950 Carpinus fangiana HOM05D000917 ORTHO05D000764 1.0e-10 70.5 104 43.3
SGA_v2.0_scaffold22G09790 Striga asiatica HOM05D000917 ORTHO05D000764 1.3e-10 70.1 111 36.9
Prupe.6G141200 Prunus persica HOM05D000917 ORTHO05D000764 2.9e-10 68.9 109 42.2
COL.COLO4_22659 Corchorus olitorius HOM05D000917 ORTHO05D000764 3.8e-10 68.6 103 43.7
Haze_23317 Corylus avellana HOM05D000917 ORTHO05D000764 6.5e-10 67.8 99 44.4
MD00G1128500 Malus domestica HOM05D000917 ORTHO05D000764 1.1e-09 67.0 103 40.8
Zm00001eb197550 Zea mays HOM05D000917 ORTHO05D000764 1.1e-09 67.0 97 38.1
CDE04G2849 Ceratophyllum demersum HOM05D000917 ORTHO05D000764 2.5e-09 65.9 101 40.6
SHI41751 Sapria himalayana HOM05D000917 ORTHO05D000764 2.5e-09 65.9 44 72.7
MBI17_g25969_MAGBIO Magnolia biondii HOM05D000917 ORTHO05D000764 5.5e-09 64.7 100 38.0
RcHm_v2.0_Chr5g0047791 Rosa chinensis HOM05D000917 ORTHO05D000764 5.5e-09 64.7 103 41.7
ECA240G0735 Erigeron canadensis HOM05D000140 ORTHO05D000087 7.2e-09 64.3 104 39.4
QL01p011327 Quercus lobata HOM05D000917 ORTHO05D000764 7.2e-09 64.3 104 45.2
MD11G1172900 Malus domestica HOM05D000917 ORTHO05D000764 1.2e-08 63.5 109 37.6
CiPaw.13G131200 Carya illinoinensis HOM05D000917 ORTHO05D000764 2.1e-08 62.8 97 41.2
Haze_23318 Corylus avellana HOM05D000917 ORTHO05D000764 3.6e-08 62.0 97 39.2
THA.LOC104813193 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 3.6e-08 62.0 100 39.0
Migut.D02397 Erythranthe guttata HOM05D000917 ORTHO05D000764 6.1e-08 61.2 97 42.3
Ah.08g223340 Amaranthus hybridus HOM05D000917 ORTHO05D000764 7.9e-08 60.8 112 38.4
FAN03G1968 Fragaria x ananassa HOM05D000917 ORTHO05D000764 7.9e-08 60.8 103 39.8
AUR62020242 Chenopodium quinoa HOM05D000917 ORTHO05D000764 1.0e-07 60.5 105 39.0
FvH4_7g18720 Fragaria vesca HOM05D000917 ORTHO05D000764 1.0e-07 60.5 103 40.8
FAN06G1806 Fragaria x ananassa HOM05D000917 ORTHO05D000764 1.0e-07 60.5 103 40.8
FAN10G1250 Fragaria x ananassa HOM05D000917 ORTHO05D000764 1.0e-07 60.5 103 40.8
CARHR069050 Cardamine hirsuta HOM05D000917 ORTHO05D000764 1.4e-07 60.1 99 40.4
Gohir.D13G226100 Gossypium hirsutum HOM05D000917 ORTHO05D000764 1.4e-07 60.1 104 38.5
CiPaw.03G190400 Carya illinoinensis HOM05D000917 ORTHO05D000764 1.8e-07 59.7 104 33.7
Gorai.013G257000 Gossypium raimondii HOM05D000917 ORTHO05D000764 1.8e-07 59.7 102 41.2
PSO675G6048 Papaver somniferum HOM05D000917 ORTHO05D000764 2.3e-07 59.3 96 42.7
vmacro04162 Vaccinium macrocarpon HOM05D000917 ORTHO05D000764 2.3e-07 59.3 100 38.0
FAN10G0837 Fragaria x ananassa HOM05D000917 ORTHO05D000764 3.0e-07 58.9 103 39.8
Duzib168G2090 Durio zibethinus HOM05D000917 ORTHO05D000764 3.9e-07 58.5 128 35.2
Sabra13G0034900 Salix brachista HOM05D000917 ORTHO05D000764 3.9e-07 58.5 111 35.1
AL2G35640 Arabidopsis lyrata HOM05D000917 ORTHO05D000764 5.1e-07 58.2 100 36.0
Rhsim13G0225900 Rhododendron simsii HOM05D000917 ORTHO05D000764 6.7e-07 57.8 100 38.0
GSVIVG01009879001 Vitis vinifera HOM05D000917 ORTHO05D000764 6.7e-07 57.8 103 35.9
Aa31sc115G40 Aethionema arabicum HOM05D000917 ORTHO05D000764 8.8e-07 57.4 100 35.0
Aqoxy1G00694 Aquilegia oxysepala HOM05D000917 ORTHO05D000764 8.8e-07 57.4 106 38.7
Haze_23321 Corylus avellana HOM05D000917 ORTHO05D000764 8.8e-07 57.4 97 36.1
SHI42884 Sapria himalayana HOM05D000917 ORTHO05D000764 8.8e-07 57.4 53 66.0
Carub.0002s2249 Capsella rubella HOM05D000917 ORTHO05D000764 1.1e-06 57.0 99 38.4
Duzib041G0621 Durio zibethinus HOM05D000917 ORTHO05D000764 1.1e-06 57.0 100 38.0
Nn6g32346 Nelumbo nucifera HOM05D000917 ORTHO05D000764 1.1e-06 57.0 96 43.8
BcaB05g24928 Brassica carinata HOM05D000917 ORTHO05D000764 1.5e-06 56.6 100 36.0
MBI17_g25960_MAGBIO Magnolia biondii HOM05D000917 ORTHO05D000764 1.5e-06 56.6 102 37.3
Prupe.1G367600 Prunus persica HOM05D000917 ORTHO05D000764 1.5e-06 56.6 98 38.8
Aa31LG3G570 Aethionema arabicum HOM05D000917 ORTHO05D000764 2.0e-06 56.2 100 35.0
AT1G75660 Arabidopsis thaliana HOM05D000917 ORTHO05D000764 2.0e-06 56.2 109 34.9
Haze_23320 Corylus avellana HOM05D000917 ORTHO05D000764 2.0e-06 56.2 97 37.1
PSO781G0270 Papaver somniferum HOM05D000917 ORTHO05D000764 2.0e-06 56.2 97 37.1
AL8G18770 Arabidopsis lyrata HOM05D000917 ORTHO05D000764 2.6e-06 55.8 100 33.0
AT5G42540 Arabidopsis thaliana HOM05D000917 ORTHO05D000764 2.6e-06 55.8 100 33.0
Gohir.A05G257200 Gossypium hirsutum HOM05D000917 ORTHO05D000764 2.6e-06 55.8 97 38.1
Gohir.D05G258700 Gossypium hirsutum HOM05D000917 ORTHO05D000764 2.6e-06 55.8 97 38.1
Gorai.009G270300 Gossypium raimondii HOM05D000917 ORTHO05D000764 2.6e-06 55.8 97 38.1
MD15G1014000 Malus domestica HOM05D000917 ORTHO05D000764 2.6e-06 55.8 98 37.8
SHI45542 Sapria himalayana HOM05D000917 ORTHO05D000764 2.6e-06 55.8 53 64.2
THA.LOC104808440 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 2.6e-06 55.8 97 37.1
Aa31LG9G12630 Aethionema arabicum HOM05D000917 ORTHO05D000764 3.3e-06 55.5 100 34.0
MD08G1014700 Malus domestica HOM05D000917 ORTHO05D000764 3.3e-06 55.5 98 37.8
Nn5g29327 Nelumbo nucifera HOM05D000917 ORTHO05D000764 3.3e-06 55.5 100 36.0
GSVIVG01024465001 Vitis vinifera HOM05D000917 ORTHO05D000764 3.3e-06 55.5 98 38.8
Cfa023549 Carpinus fangiana HOM05D000917 ORTHO05D000764 4.4e-06 55.1 96 34.4
Duzib093G1078 Durio zibethinus HOM05D000917 ORTHO05D000764 4.4e-06 55.1 97 38.1
TAR381G0010 Trochodendron aralioides HOM05D000917 ORTHO05D000764 4.4e-06 55.1 103 35.0
Cfa009964 Carpinus fangiana HOM05D000917 ORTHO05D000764 5.7e-06 54.7 104 34.6
Gohir.A05G187400 Gossypium hirsutum HOM05D000917 ORTHO05D000764 5.7e-06 54.7 96 41.7
Gohir.D05G190300 Gossypium hirsutum HOM05D000917 ORTHO05D000764 5.7e-06 54.7 96 41.7
Gorai.009G195600 Gossypium raimondii HOM05D000917 ORTHO05D000764 5.7e-06 54.7 96 41.7
HanXRQChr01g0004541 Helianthus annuus HOM05D000917 ORTHO05D000764 5.7e-06 54.7 102 36.3
Lj4A26G46 Lonicera japonica HOM05D000917 ORTHO05D000764 5.7e-06 54.7 103 35.9
PSO541G1877 Papaver somniferum HOM05D000917 ORTHO05D000764 5.7e-06 54.7 97 36.1
SalBow6G4640 Salvia bowleyana HOM05D000917 ORTHO05D000764 5.7e-06 54.7 106 34.9
CDE04G2188 Ceratophyllum demersum HOM05D000917 ORTHO05D000764 7.4e-06 54.3 101 37.6
COL.COLO4_26164 Corchorus olitorius HOM05D000917 ORTHO05D000764 7.4e-06 54.3 97 38.1
Lsat_1_v5_gn_2_8340 Lactuca sativa HOM05D000917 ORTHO05D000764 7.4e-06 54.3 110 32.7
PSO700G0073 Papaver somniferum HOM05D000917 ORTHO05D000764 7.4e-06 54.3 97 36.1
Thecc.08G042300 Theobroma cacao HOM05D000917 ORTHO05D000764 7.4e-06 54.3 100 38.0
TAR625G1417 Trochodendron aralioides HOM05D000917 ORTHO05D000764 7.4e-06 54.3 96 41.7
BcaC08g47056 Brassica carinata HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
A07p41190 Brassica napus HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
C06p49610 Brassica napus HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
BolC6t39999H Brassica oleracea HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
BraA07t31654Z Brassica rapa HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
CANSAT54G2535 Cannabis sativa HOM05D000917 ORTHO05D000764 9.7e-06 53.9 104 33.7
MELO3C002953.2 Cucumis melo HOM05D000917 ORTHO05D000764 9.7e-06 53.9 97 38.1
Dinv29182 Davidia involucrata HOM05D000917 ORTHO05D000764 9.7e-06 53.9 98 36.7
Dinv31829 Davidia involucrata HOM05D000917 ORTHO05D000764 9.7e-06 53.9 98 37.8
Thhalv10018062m.g Eutrema salsugineum HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
HanXRQChr12g0379411 Helianthus annuus HOM05D000917 ORTHO05D000764 9.7e-06 53.9 107 34.6
Oeu007055.2 Olea europaea HOM05D000917 ORTHO05D000764 9.7e-06 53.9 130 32.3
Sp5g30760 Schrenkiella parvula HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 34.0
THA.LOC104809408 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 9.7e-06 53.9 100 35.0
HPP92_001526 Vanilla planifolia HOM05D000917 ORTHO05D000764 9.7e-06 53.9 102 36.3


User provided reference genes

Program Settings