Gene: Duzib168G2090
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib168G2090
- Transcript Identifier Duzib168G2090.01
- Gene Type Coding gene
- Location NW_019168159.1 : 4955540-4961594 : negative
Gene Family Information
- ID HOM05D000917
- #Genes/#Species 655/100
- Phylogenetic origin
- ID ORTHO05D000764
- #Genes/#Species 624/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name LOC111284263
- name XM_022872980.1
- pid XP_022728715.1
- id gene-LOC111284263
- uniprot A0A6P5XKL6
Descriptions
- product 5'-3' exoribonuclease 3-like
- Description The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Cre06.g280050 |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0004527 | IEA | InterPro | exonuclease activity | |
| GO:0004534 | IEA | GOA Database | 5'-3' exoribonuclease activity | |
| GO:0004534 | IEA | InterPro | 5'-3' exoribonuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.4.3.2 | RNA processing.RNA surveillance.non-canonical RNA decapping and decay.exoribonuclease (RAT1/XRN2) |