Gene: Duzib093G1078
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib093G1078
- Transcript Identifier Duzib093G1078.01
- Gene Type Coding gene
- Location NW_019167937.1 : 34715279-34723875 : positive
Gene Family Information
- ID HOM05D000917
- #Genes/#Species 655/100
- Phylogenetic origin
- ID ORTHO05D000764
- #Genes/#Species 624/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111312801
- name XM_022913424.1
- pid XP_022769159.1
- id gene-LOC111312801
- uniprot A0A6P6AWM6
Descriptions
- product 5'-3' exoribonuclease 3-like, transcript variant X4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010587 | ISO | PLAZA Integrative Orthology | miRNA catabolic process | AT1G75660 |
| GO:0060149 | ISO | PLAZA Integrative Orthology | negative regulation of posttranscriptional gene silencing | AT1G75660 |
| GO:0000967 | ISO | PLAZA Integrative Orthology | rRNA 5'-end processing | AT1G75660 |
| GO:0071035 | ISO | PLAZA Integrative Orthology | nuclear polyadenylation-dependent rRNA catabolic process | AT1G75660 |
| GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004527 | IEA | GOA Database | exonuclease activity | |
| GO:0004527 | IEA | InterPro | exonuclease activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Cre06.g280050 |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004534 | IEA | GOA Database | 5'-3' exoribonuclease activity | |
| GO:0004534 | IEA | InterPro | 5'-3' exoribonuclease activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |