Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI30032 Sapria himalayana HOM05D003161 ORTHO05D015567 5.5e-62 240.7 116 100.0
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 4.4e-27 124.8 101 63.4
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.7e-26 122.9 102 63.7
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 2.2e-26 122.5 102 65.7
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 8.2e-26 120.6 102 63.7
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.2e-26 120.6 102 63.7
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.2e-26 120.6 102 63.7
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.4e-25 119.8 102 63.7
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.4e-25 119.8 102 63.7
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 2.4e-25 119.0 102 61.8
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.4e-25 119.0 102 62.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 4.1e-25 118.2 102 61.8
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 5.3e-25 117.9 102 61.8
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 9.1e-25 117.1 102 63.7
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 9.1e-25 117.1 102 63.7
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 2.6e-24 115.5 102 61.8
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 2.6e-24 115.5 102 62.7
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 7.7e-24 114.0 103 60.2
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 1.0e-23 113.6 103 60.2
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.7e-23 112.8 102 61.8
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 2.9e-23 112.1 102 57.8
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 3.8e-23 111.7 102 58.8
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 3.8e-23 111.7 103 60.2
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 3.8e-23 111.7 101 59.4
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 3.8e-23 111.7 101 57.4
Cpa.g.sc85.24 Carica papaya HOM05D003161 ORTHO05D015567 5.0e-23 111.3 101 59.4
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.0e-23 111.3 103 58.3
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 5.0e-23 111.3 103 63.1
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 6.5e-23 110.9 103 59.2
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 8.5e-23 110.5 102 60.8
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 1.1e-22 110.2 113 54.0
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.1e-22 110.2 103 59.2
Hund30424 Selenicereus undatus HOM05D003161 ORTHO05D015567 1.1e-22 110.2 100 61.0
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 1.9e-22 109.4 103 58.3
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 2.5e-22 109.0 103 55.3
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 2.5e-22 109.0 102 58.8
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 2.5e-22 109.0 103 59.2
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 3.2e-22 108.6 103 56.3
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 3.2e-22 108.6 101 57.4
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 3.2e-22 108.6 101 57.4
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 3.2e-22 108.6 103 55.3
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 5.5e-22 107.8 103 57.3
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 5.5e-22 107.8 103 55.3
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 5.5e-22 107.8 102 59.8
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 7.2e-22 107.5 102 57.8
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 7.2e-22 107.5 104 55.8
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 1.2e-21 106.7 101 56.4
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 1.2e-21 106.7 101 55.4
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 2.1e-21 105.9 102 56.9
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 2.7e-21 105.5 101 55.4
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 2.7e-21 105.5 101 56.4
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 2.7e-21 105.5 101 56.4
Hund18985 Selenicereus undatus HOM05D003161 ORTHO05D015567 2.7e-21 105.5 120 53.3
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 3.6e-21 105.1 104 58.7
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 3.6e-21 105.1 103 57.3
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 6.1e-21 104.4 104 57.7
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 6.1e-21 104.4 103 56.3
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 8.0e-21 104.0 99 57.6
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 8.0e-21 104.0 105 55.2
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 8.0e-21 104.0 105 55.2
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.4e-20 103.2 101 54.5
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.4e-20 103.2 101 54.5
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 1.8e-20 102.8 102 56.9
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 1.8e-20 102.8 101 57.4
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 3.0e-20 102.1 99 57.6
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 3.0e-20 102.1 104 54.8
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 3.0e-20 102.1 103 57.3
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 4.0e-20 101.7 104 55.8
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 4.0e-20 101.7 102 52.9
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 4.0e-20 101.7 122 52.5
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 4.0e-20 101.7 102 52.9
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 5.2e-20 101.3 103 56.3
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 5.2e-20 101.3 99 57.6
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 5.2e-20 101.3 101 55.4
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 6.8e-20 100.9 99 56.6
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 8.8e-20 100.5 99 55.6
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 8.8e-20 100.5 99 55.6
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 8.8e-20 100.5 99 55.6
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 8.8e-20 100.5 104 55.8
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 8.8e-20 100.5 103 54.4
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 8.8e-20 100.5 102 54.9
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.2e-19 100.1 99 55.6
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.2e-19 100.1 99 55.6
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 2.0e-19 99.4 102 53.9
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 2.0e-19 99.4 99 55.6
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 2.6e-19 99.0 103 54.4
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 2.6e-19 99.0 99 55.6
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 4.4e-19 98.2 100 52.0
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 4.4e-19 98.2 107 52.3
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 9.7e-19 97.1 102 51.0
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 1.7e-18 96.3 99 54.5
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 2.8e-18 95.5 103 52.4
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 3.7e-18 95.1 105 53.3
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 3.7e-18 95.1 102 51.0
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 4.8e-18 94.7 99 53.5
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.4e-17 93.2 104 54.8
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 1.8e-17 92.8 104 51.9
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 4.5e-16 88.2 104 51.0
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 1.0e-15 87.0 117 45.3
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 1.0e-15 87.0 101 52.5
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 4.0e-12 75.1 125 44.0
SEGI_32968 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 4.0e-12 75.1 125 44.0
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.6e-11 72.4 78 51.3
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 3.4e-11 72.0 101 45.5
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 1.8e-09 66.2 125 35.2
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.4e-09 65.9 99 43.4
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 9.1e-09 63.9 146 32.9
Dinv25019 Davidia involucrata HOM05D003161 ORTHO05D015567 1.2e-08 63.5 52 61.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 3.5e-08 62.0 139 31.7
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 1.3e-07 60.1 52 57.7
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 2.3e-07 59.3 55 54.5


User provided reference genes

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