Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17005 Sapria himalayana HOM05D001734 ORTHO05D003483 6.9e-145 517.3 263 100.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 5.4e-33 145.6 223 39.0
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 7.8e-32 141.7 216 39.8
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.7e-31 140.6 216 40.3
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.1e-30 137.9 221 40.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.9e-30 137.1 224 40.2
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 7.3e-30 135.2 237 37.6
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 1.4e-28 131.0 238 36.1
Cpa.g.sc76.49 Carica papaya HOM05D001734 ORTHO05D003483 4.0e-28 129.4 213 38.5
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 5.8e-27 125.6 232 39.2
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.4e-26 122.1 236 34.3
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 8.4e-26 121.7 237 33.8
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.9e-25 120.6 223 35.9
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 2.4e-25 120.2 215 36.7
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.4e-25 120.2 237 33.8
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 4.2e-25 119.4 237 33.8
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.2e-24 117.9 219 37.4
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 2.1e-24 117.1 235 31.5
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.3e-23 114.4 213 33.8
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 2.3e-23 113.6 255 32.5
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.9e-22 110.5 223 36.3
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.6e-21 107.5 204 37.7
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.1e-21 107.1 217 35.9
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 6.2e-21 105.5 206 35.0
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 8.1e-21 105.1 213 31.9
Hma1.2p1_0701F.1_g205860 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 8.1e-21 105.1 231 32.9
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 8.1e-21 105.1 223 33.6
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 2.4e-20 103.6 241 32.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.1e-20 103.2 219 32.9
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 9.0e-20 101.7 204 32.4
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.5e-19 100.9 219 32.0
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.0e-19 100.5 233 34.3
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 2.6e-19 100.1 219 32.0
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 4.5e-19 99.4 204 32.8
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 7.6e-19 98.6 218 33.0
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 7.6e-19 98.6 231 30.7
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 9.9e-19 98.2 229 33.6
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 9.9e-19 98.2 221 32.6
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 9.9e-19 98.2 226 31.4
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.7e-18 97.4 204 31.9
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.7e-18 97.4 204 31.9
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.9e-18 96.7 236 30.5
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.9e-18 96.7 248 33.1
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 2.9e-18 96.7 214 32.2
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 3.8e-18 96.3 217 34.1
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 4.9e-18 95.9 234 31.6
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 8.4e-18 95.1 204 31.9
Ca_05696_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 8.4e-18 95.1 184 37.5
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.1e-17 94.7 226 30.1
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.4e-17 94.4 204 31.9
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.4e-17 94.4 206 31.6
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.9e-17 94.0 212 30.2
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.9e-17 94.0 212 30.2
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 2.4e-17 93.6 216 32.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 2.4e-17 93.6 218 29.8
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 2.4e-17 93.6 203 35.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 3.2e-17 93.2 212 30.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 3.2e-17 93.2 212 30.2
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 4.2e-17 92.8 232 31.9
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.2e-17 92.8 231 29.9
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.2e-16 91.3 200 34.5
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.6e-16 90.9 199 35.2
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.6e-16 89.4 199 32.2
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 1.0e-15 88.2 213 33.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.0e-15 88.2 203 34.5
VMungo1309G2093 Vigna mungo HOM05D001734 ORTHO05D003483 1.3e-15 87.8 204 32.4
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.8e-15 87.4 237 30.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 5.1e-15 85.9 202 32.2
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 6.7e-15 85.5 201 32.8
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.5e-14 83.6 223 29.6
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 5.6e-14 82.4 198 31.3
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 5.6e-14 82.4 232 28.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 5.6e-14 82.4 214 28.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 7.4e-14 82.0 208 33.2
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.8e-13 80.1 227 29.1
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 3.7e-13 79.7 219 28.3
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 8.1e-13 78.6 215 32.1
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.1e-12 78.2 240 27.9
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.8e-12 77.4 223 28.3
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 5.3e-12 75.9 237 28.3
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 6.9e-12 75.5 207 32.4
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 6.9e-12 75.5 223 28.3
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.5e-11 72.8 225 27.1
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 7.9e-08 62.0 219 26.0
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.8e-07 60.8 213 25.8
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 5.6e-06 55.8 251 26.7


User provided reference genes

Program Settings