Gene: vmacro19388

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro19388
  • Transcript Identifier vmacro19388-RA
  • Gene Type Coding gene
  • Location chr5_Vaccinium_macrocarpon_Stevens_v1 : 8860260-8894360 : positive

Gene Family Information

  • ID HOM05D001734
  • #Genes/#Species 373/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro19388_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to ATM: Serine/threonine-protein kinase ATM (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043247
ISO
PLAZA Integrative Orthologytelomere maintenance in response to DNA damage AT3G48190
GO:0032204
ISO
PLAZA Integrative Orthologyregulation of telomere maintenance AT3G48190
GO:0010212
ISO
PLAZA Integrative Orthologyresponse to ionizing radiation AT3G48190
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT3G48190
GO:0032504
ISO
PLAZA Integrative Orthologymulticellular organism reproduction AT3G48190
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT3G48190
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT3G48190
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT3G48190
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT3G48190
GO:0033044
ISO
PLAZA Integrative Orthologyregulation of chromosome organization AT3G48190
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G48190
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT3G48190
GO:2001020
ISO
PLAZA Integrative Orthologyregulation of response to DNA damage stimulus AT3G48190
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT3G48190
GO:0006974
IEA
InterProcellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016301
ISO
PLAZA Homology (enrichment)kinase activity HOM05D001734
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48190
GO:0000285
ISO
PLAZA Integrative Orthology1-phosphatidylinositol-3-phosphate 5-kinase activity AT3G48190
GO:0004674
IEA
InterProprotein serine/threonine kinase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR038980 Serine/threonine-protein kinase ATM, plant
Mapman id Description
35.1 not assigned.annotated