Gene: Cc04_g14140
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g14140
- Transcript Identifier Cc04_g14140.1
- Gene Type Coding gene
- Location chr4 : 20183958-20204821 : negative
Gene Family Information
- ID HOM05D001734
- #Genes/#Species 373/100
- Phylogenetic origin
- ID ORTHO05D003483
- #Genes/#Species 221/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB D7LRJ8
- UniProtKB B9RB21
- UniProtKB I1NJK0
- UniProtKB Q9M3G7
- id GSCOCG00035943001
Descriptions
- Description Putative Serine/threonine-protein kinase ATM
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043247 | ISO | PLAZA Integrative Orthology | telomere maintenance in response to DNA damage | AT3G48190 |
| GO:0032204 | ISO | PLAZA Integrative Orthology | regulation of telomere maintenance | AT3G48190 |
| GO:0010212 | ISO | PLAZA Integrative Orthology | response to ionizing radiation | AT3G48190 |
| GO:0010332 | ISO | PLAZA Integrative Orthology | response to gamma radiation | AT3G48190 |
| GO:0032504 | ISO | PLAZA Integrative Orthology | multicellular organism reproduction | AT3G48190 |
| GO:0051321 | ISO | PLAZA Integrative Orthology | meiotic cell cycle | AT3G48190 |
| GO:0007129 | ISO | PLAZA Integrative Orthology | homologous chromosome pairing at meiosis | AT3G48190 |
| GO:0006303 | ISO | PLAZA Integrative Orthology | double-strand break repair via nonhomologous end joining | AT3G48190 |
| GO:0045003 | ISO | PLAZA Integrative Orthology | double-strand break repair via synthesis-dependent strand annealing | AT3G48190 |
| GO:0033044 | ISO | PLAZA Integrative Orthology | regulation of chromosome organization | AT3G48190 |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | AT3G48190 |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT3G48190 |
| GO:2001020 | ISO | PLAZA Integrative Orthology | regulation of response to DNA damage stimulus | AT3G48190 |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT3G48190 |
| GO:0006974 | IEA | InterPro | cellular response to DNA damage stimulus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016301 | ISO | PLAZA Homology (enrichment) | kinase activity | HOM05D001734 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G48190 |
| GO:0000285 | ISO | PLAZA Integrative Orthology | 1-phosphatidylinositol-3-phosphate 5-kinase activity | AT3G48190 |
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |