Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17002 Sapria himalayana HOM05D001734 ORTHO05D003483 5.4e-119 431.0 220 100.0
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.8e-37 160.2 177 50.8
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 5.2e-37 158.7 155 53.5
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 6.8e-37 158.3 155 53.5
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 6.8e-37 158.3 155 53.5
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 8.8e-37 157.9 152 55.9
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 2.2e-35 153.3 151 55.6
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.8e-35 152.9 151 57.0
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.7e-35 152.5 152 54.6
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 4.8e-35 152.1 151 57.0
Lj9A448G32 Lonicera japonica HOM05D001734 ORTHO05D003483 6.3e-35 151.8 217 43.8
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.8e-34 150.2 152 55.9
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 2.4e-34 149.8 152 55.3
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 7.0e-34 148.3 152 54.6
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 2.7e-33 146.4 152 50.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.7e-33 146.4 196 45.4
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 2.7e-33 146.4 151 51.7
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 4.5e-33 145.6 152 55.3
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.0e-32 144.4 177 49.2
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.3e-32 144.1 151 51.7
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.3e-32 144.1 152 51.3
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.7e-32 143.7 152 50.7
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 6.5e-32 141.7 151 52.3
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.1e-31 141.0 152 50.7
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.9e-31 140.2 154 48.7
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 4.2e-31 139.0 152 48.0
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 5.5e-31 138.7 148 53.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 7.2e-31 138.3 152 50.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 9.5e-31 137.9 152 51.3
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 9.5e-31 137.9 147 49.7
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.2e-30 137.5 152 50.7
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 2.1e-30 136.7 179 45.8
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 3.6e-30 136.0 179 45.3
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 3.6e-30 136.0 148 49.3
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.8e-29 133.7 151 47.7
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.8e-29 133.7 151 49.7
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.8e-29 133.7 177 44.1
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 3.0e-29 132.9 177 45.2
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 8.8e-29 131.3 152 46.7
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 8.8e-29 131.3 159 47.2
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.5e-28 130.6 150 48.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.5e-28 130.6 151 47.7
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.5e-28 130.6 162 42.0
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 2.0e-28 130.2 151 45.7
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 2.6e-28 129.8 150 47.3
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.6e-28 129.8 152 45.4
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 3.4e-28 129.4 152 45.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 4.4e-28 129.0 152 45.4
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 4.4e-28 129.0 148 46.6
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 5.7e-28 128.6 152 47.4
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 5.7e-28 128.6 148 48.0
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 7.5e-28 128.3 151 46.4
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 9.8e-28 127.9 152 45.4
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.7e-27 127.1 177 42.4
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.7e-27 127.1 175 43.4
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.8e-27 126.3 152 46.7
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.8e-27 126.3 152 46.1
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.8e-27 126.3 175 43.4
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.7e-27 125.9 152 46.7
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 4.9e-27 125.6 151 46.4
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 4.9e-27 125.6 152 44.7
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 6.3e-27 125.2 204 36.3
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 8.3e-27 124.8 153 44.4
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.1e-26 124.4 196 38.8
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.1e-26 124.4 152 43.4
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.4e-26 124.0 151 45.0
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.4e-26 124.0 151 45.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 1.8e-26 123.6 151 45.7
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.8e-26 123.6 151 45.7
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 7.0e-26 121.7 153 45.1
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 7.0e-26 121.7 151 43.7
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 9.2e-26 121.3 148 47.3
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 1.6e-25 120.6 151 43.0
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.6e-25 120.6 148 46.6
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.6e-25 120.6 148 44.6
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 4.5e-25 119.0 153 45.1
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.5e-25 119.0 109 53.2
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.7e-24 117.1 174 40.8
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.7e-24 117.1 148 45.3
TPR.G6035 Trifolium pratense HOM05D001734 ORTHO05D003483 2.9e-24 116.3 148 43.9
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 1.5e-23 114.0 151 39.7
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.5e-23 114.0 163 43.6
VMungo1309G1151 Vigna mungo HOM05D001734 ORTHO05D003483 4.3e-23 112.5 148 43.2
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 9.5e-23 111.3 153 41.8
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 2.8e-22 109.8 136 46.3
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 1.2e-20 104.4 205 36.1
CBR_g290 Chara braunii HOM05D001734 ORTHO05D003483 2.7e-17 93.2 147 38.8
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 5.0e-16 89.0 159 37.1
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 5.0e-16 89.0 156 37.8
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 7.3e-15 85.1 156 39.1
CAN.G853.42 Capsicum annuum HOM05D001734 ORTHO05D003483 1.0e-13 81.3 95 41.1
QL01p024072 Quercus lobata HOM05D001734 ORTHO05D020518 2.0e-09 67.0 73 50.7
SEGI_22749 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 7.8e-09 65.1 77 39.0
CSS0037969 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.7e-08 63.9 80 48.8
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 3.9e-08 62.8 79 48.1
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 5.6e-07 58.9 79 44.3


User provided reference genes

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