Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16634 Sapria himalayana HOM05D000246 ORTHO05D005396 3.0e-38 161.4 83 100.0
Thecc.02G089200 Theobroma cacao HOM05D000246 ORTHO05D005396 1.6e-23 112.5 79 75.9
Duzib132G0704 Durio zibethinus HOM05D000246 ORTHO05D005396 2.1e-23 112.1 79 75.9
Dinv24306 Davidia involucrata HOM05D000246 ORTHO05D005396 2.0e-21 105.5 79 72.2
Gohir.D13G034100 Gossypium hirsutum HOM05D000246 ORTHO05D005396 3.3e-21 104.8 80 73.8
Potri.003G015800 Populus trichocarpa HOM05D000246 ORTHO05D005396 3.3e-21 104.8 79 69.6
QL02p099436 Quercus lobata HOM05D000246 ORTHO05D005396 9.7e-21 103.2 79 70.9
Gorai.013G038600 Gossypium raimondii HOM05D000246 ORTHO05D005396 1.7e-20 102.4 80 72.5
Ciclev10000077m.g Citrus clementina HOM05D000246 ORTHO05D005396 2.2e-20 102.1 79 67.1
COL.COLO4_11771 Corchorus olitorius HOM05D000246 ORTHO05D005396 2.2e-20 102.1 79 69.6
Sabra03G0009700 Salix brachista HOM05D000246 ORTHO05D005396 2.2e-20 102.1 79 68.4
Gohir.A13G035800 Gossypium hirsutum HOM05D000246 ORTHO05D005396 2.8e-20 101.7 80 72.5
COL.COLO4_11772 Corchorus olitorius HOM05D000246 ORTHO05D005396 3.7e-20 101.3 79 69.6
Sabra03G0008800 Salix brachista HOM05D000246 ORTHO05D005396 4.8e-20 100.9 79 68.4
Haze_01763 Corylus avellana HOM05D000246 ORTHO05D005396 8.2e-20 100.1 79 68.4
Sabra03G0009400 Salix brachista HOM05D000246 ORTHO05D005396 1.4e-19 99.4 79 67.1
CiPaw.05G049800 Carya illinoinensis HOM05D000246 ORTHO05D005396 1.8e-19 99.0 79 67.1
Sabra03G0009100 Salix brachista HOM05D000246 ORTHO05D005396 1.8e-19 99.0 79 67.1
GSVIVG01023325001 Vitis vinifera HOM05D000246 ORTHO05D005396 2.4e-19 98.6 81 70.4
Lalb_Chr20g0123591 Lupinus albus HOM05D000246 ORTHO05D005396 4.1e-19 97.8 79 64.6
PGR042G0910 Punica granatum HOM05D000246 ORTHO05D005396 1.6e-18 95.9 79 65.8
Sc10g0005930 Simmondsia chinensis HOM05D000246 ORTHO05D005396 4.5e-18 94.4 81 66.7
Ca_00062_v3 Cicer arietinum L. HOM05D000246 ORTHO05D005396 7.7e-18 93.6 79 63.3
Manes.10G122800 Manihot esculenta HOM05D000246 ORTHO05D005396 7.7e-18 93.6 79 63.3
Atru.chr6.555 Acer truncatum HOM05D000246 ORTHO05D005396 1.3e-17 92.8 79 68.4
Cpa.g.sc31.48 Carica papaya HOM05D000246 ORTHO05D005396 2.2e-17 92.0 79 65.8
TPR.G23583 Trifolium pratense HOM05D000246 ORTHO05D005396 2.2e-17 92.0 79 59.5
TAR624G1231 Trochodendron aralioides HOM05D000246 ORTHO05D005396 2.2e-17 92.0 78 64.1
TPR.G2105 Trifolium pratense HOM05D000246 ORTHO05D005396 2.9e-17 91.7 79 59.5
VMungo0540G2260 Vigna mungo HOM05D000246 ORTHO05D005396 2.9e-17 91.7 79 63.3
MSTRG.16508 Avicennia marina HOM05D000246 ORTHO05D005396 3.8e-17 91.3 79 60.8
Hma1.2p1_2221F.1_g317340 Hydrangea macrophylla HOM05D000246 ORTHO05D005396 3.8e-17 91.3 79 63.3
Sed0017184 Sechium edule HOM05D000246 ORTHO05D005396 1.1e-16 89.7 79 63.3
Hma1.2p1_3213F.1_g334020 Hydrangea macrophylla HOM05D000246 ORTHO05D005396 1.5e-16 89.4 78 62.8
Lj6g0022943 Lotus japonicus HOM05D000246 ORTHO05D005396 4.2e-16 87.8 79 59.5
MBI17_g20812_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D005396 4.2e-16 87.8 74 63.5
Nitab4.5_0008546g0020 Nicotiana tabacum HOM05D000246 ORTHO05D005396 5.5e-16 87.4 79 62.0
Psat1g222120 Pisum sativum HOM05D000246 ORTHO05D005396 5.5e-16 87.4 79 58.2
MELO3C019447.2 Cucumis melo HOM05D000246 ORTHO05D005396 1.2e-15 86.3 79 60.8
CsaV3_3G019190 Cucumis sativus L. HOM05D000246 ORTHO05D005396 1.2e-15 86.3 79 60.8
Nitab4.5_0001744g0020 Nicotiana tabacum HOM05D000246 ORTHO05D005396 1.2e-15 86.3 79 62.0
Phvul.006G216200 Phaseolus vulgaris HOM05D000246 ORTHO05D005396 1.6e-15 85.9 79 58.2
Medtr2g006440 Medicago truncatula HOM05D000246 ORTHO05D005396 2.7e-15 85.1 79 57.0
Eucgr.G00562 Eucalyptus grandis HOM05D000246 ORTHO05D005396 4.7e-15 84.3 79 57.0
vmacro01744 Vaccinium macrocarpon HOM05D000246 ORTHO05D005396 4.7e-15 84.3 79 60.8
Nn2g14796 Nelumbo nucifera HOM05D000246 ORTHO05D005396 8.0e-15 83.6 78 59.0
TWI59G0870 Tripterygium wilfordii HOM05D000246 ORTHO05D005396 8.0e-15 83.6 79 57.0
Migut.B00814 Erythranthe guttata HOM05D000246 ORTHO05D005396 1.0e-14 83.2 79 57.0
CAN.G798.21 Capsicum annuum HOM05D000246 ORTHO05D005396 1.8e-14 82.4 80 58.8
Lsat_1_v5_gn_5_105701 Lactuca sativa HOM05D000246 ORTHO05D005396 2.3e-14 82.0 79 57.0
ECA234G4461 Erigeron canadensis HOM05D000246 ORTHO05D005396 3.0e-14 81.6 79 55.7
Cc02_g22770 Coffea canephora HOM05D000246 ORTHO05D005396 5.2e-14 80.9 78 57.7
unitig_8.g4526 Utricularia gibba HOM05D000246 ORTHO05D005396 8.8e-14 80.1 79 58.2
ATR0071G007 Amborella trichopoda HOM05D000246 ORTHO05D005396 1.5e-13 79.3 79 60.8
CDE04G0206 Ceratophyllum demersum HOM05D000246 ORTHO05D005396 1.5e-13 79.3 80 55.0
HanXRQChr10g0298131 Helianthus annuus HOM05D000246 ORTHO05D005396 2.0e-13 79.0 79 54.4
Rhsim11G0127500 Rhododendron simsii HOM05D000246 ORTHO05D005396 2.0e-13 79.0 79 58.2
Lj5C254G21 Lonicera japonica HOM05D000246 ORTHO05D005396 2.6e-13 78.6 79 51.9
PGSC0003DMG400023802 Solanum tuberosum HOM05D000246 ORTHO05D005396 3.4e-13 78.2 80 58.8
Ah.01g020570 Amaranthus hybridus HOM05D000246 ORTHO05D005396 4.4e-13 77.8 84 53.6
arahy.Tifrunner.gnm1.ann1.9F5B0U Arachis hypogaea HOM05D000246 ORTHO05D005396 4.4e-13 77.8 78 52.6
arahy.Tifrunner.gnm1.ann1.P64QHW Arachis hypogaea HOM05D000246 ORTHO05D005396 4.4e-13 77.8 78 53.8
Glyma.08G188100 Glycine max HOM05D000246 ORTHO05D005396 7.5e-13 77.0 79 54.4
CSS0032566 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005396 9.8e-13 76.6 79 54.4
CSS0044641 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005396 9.8e-13 76.6 79 54.4
CDE08G1044 Ceratophyllum demersum HOM05D000246 ORTHO05D005396 9.8e-13 76.6 79 53.2
Solyc01g103960.3 Solanum lycopersicum HOM05D000246 ORTHO05D005396 9.8e-13 76.6 80 57.5
Glyma.12G170000 Glycine max HOM05D000246 ORTHO05D005396 1.3e-12 76.3 79 53.2
Oeu032246.1 Olea europaea HOM05D000246 ORTHO05D005396 1.3e-12 76.3 79 50.6
Sopen01g046350 Solanum pennellii HOM05D000246 ORTHO05D005396 1.7e-12 75.9 80 57.5
Actinidia39024 Actinidia chinensis HOM05D000246 ORTHO05D005396 2.2e-12 75.5 80 58.8
arahy.Tifrunner.gnm1.ann1.V2A8TE Arachis hypogaea HOM05D000246 ORTHO05D005396 2.8e-12 75.1 77 53.2
Prupe.4G271400 Prunus persica HOM05D000246 ORTHO05D005396 2.8e-12 75.1 78 51.3
Hund06556 Selenicereus undatus HOM05D000246 ORTHO05D005396 4.8e-12 74.3 81 56.8
Carub.0001s1051 Capsella rubella HOM05D000246 ORTHO05D005396 1.1e-11 73.2 79 55.7
THA.LOC104809610 Tarenaya hassleriana HOM05D000246 ORTHO05D005396 1.1e-11 73.2 79 58.2
Peaxi162Scf00011g00639 Petunia axillaris HOM05D000246 ORTHO05D005396 1.4e-11 72.8 79 58.2
EL10Ac9g21897 Beta vulgaris HOM05D000246 ORTHO05D005396 2.4e-11 72.0 80 51.2
arahy.Tifrunner.gnm1.ann1.GBY9UZ Arachis hypogaea HOM05D000246 ORTHO05D005396 3.1e-11 71.6 77 49.4
CANSAT11G0299 Cannabis sativa HOM05D000246 ORTHO05D005396 3.1e-11 71.6 78 57.7
HPP92_004440 Vanilla planifolia HOM05D000246 ORTHO05D005396 5.4e-11 70.9 79 55.7
Thhalv10006602m.g Eutrema salsugineum HOM05D000246 ORTHO05D005396 7.0e-11 70.5 79 50.6
FvH4_5g28920 Fragaria vesca HOM05D000246 ORTHO05D005396 7.0e-11 70.5 79 49.4
FAN04G2409 Fragaria x ananassa HOM05D000246 ORTHO05D005396 7.0e-11 70.5 79 49.4
FAN13G0468 Fragaria x ananassa HOM05D000246 ORTHO05D005396 7.0e-11 70.5 79 49.4
FAN18G0190 Fragaria x ananassa HOM05D000246 ORTHO05D005396 7.0e-11 70.5 79 49.4
BcaNung06376 Brassica carinata HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 50.6
A08p33740 Brassica napus HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 51.9
C08p14030 Brassica napus HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 51.9
BolC8t49040H Brassica oleracea HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 51.9
BolC8t52382H Brassica oleracea HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 50.6
BraA08t35290Z Brassica rapa HOM05D000246 ORTHO05D005396 1.2e-10 69.7 79 51.9
BcaC07g38630 Brassica carinata HOM05D000246 ORTHO05D005396 1.6e-10 69.3 79 51.9
CARHR011150 Cardamine hirsuta HOM05D000246 ORTHO05D005396 1.6e-10 69.3 79 51.9
AUR62011515 Chenopodium quinoa HOM05D000246 ORTHO05D005396 2.7e-10 68.6 80 51.2
C08p48440 Brassica napus HOM05D000246 ORTHO05D005396 3.5e-10 68.2 79 50.6
RcHm_v2.0_Chr7g0221231 Rosa chinensis HOM05D000246 ORTHO05D005396 3.5e-10 68.2 79 48.1
AL1G21910 Arabidopsis lyrata HOM05D000246 ORTHO05D005396 4.5e-10 67.8 79 53.2
AUR62016334 Chenopodium quinoa HOM05D000246 ORTHO05D005396 5.9e-10 67.4 80 51.2
DCAR_006693 Daucus carota HOM05D000246 ORTHO05D005396 5.9e-10 67.4 78 47.4
MD02G1262900 Malus domestica HOM05D000246 ORTHO05D005396 5.9e-10 67.4 78 47.4
arahy.Tifrunner.gnm1.ann1.4W3SCV Arachis hypogaea HOM05D000246 ORTHO05D015415 7.7e-10 67.0 77 46.8
BcaC07g38599 Brassica carinata HOM05D000246 ORTHO05D005396 7.7e-10 67.0 79 51.9
AT1G10930 Arabidopsis thaliana HOM05D000246 ORTHO05D005396 1.0e-09 66.6 79 51.9
Dinv19386 Davidia involucrata HOM05D000246 ORTHO05D005396 1.7e-09 65.9 61 59.0
Sp1g09640 Schrenkiella parvula HOM05D000246 ORTHO05D005396 1.7e-09 65.9 79 50.6
A09p64760 Brassica napus HOM05D000246 ORTHO05D005396 2.9e-09 65.1 79 49.4
BraA09t41819Z Brassica rapa HOM05D000246 ORTHO05D005396 2.9e-09 65.1 79 49.4
HanXRQChr03g0065231 Helianthus annuus HOM05D000246 ORTHO05D005396 3.8e-09 64.7 78 48.7
MD07G1057400 Malus domestica HOM05D000246 ORTHO05D005396 3.8e-09 64.7 78 48.7
Aqoxy5G02652 Aquilegia oxysepala HOM05D000246 ORTHO05D005396 3.2e-08 61.6 78 47.4
arahy.Tifrunner.gnm1.ann1.J1FRWC Arachis hypogaea HOM05D000246 ORTHO05D005396 4.2e-08 61.2 74 52.7
Thhalv10023226m.g Eutrema salsugineum HOM05D000246 ORTHO05D005396 7.2e-08 60.5 79 45.6
AL2G15560 Arabidopsis lyrata HOM05D000246 ORTHO05D005396 1.6e-07 59.3 81 46.9
SGA_v2.0_scaffold110G31337 Striga asiatica HOM05D000246 ORTHO05D005396 2.1e-07 58.9 80 48.8
Sp2g03660 Schrenkiella parvula HOM05D000246 ORTHO05D005396 2.7e-07 58.5 79 46.8
vmacro01746 Vaccinium macrocarpon HOM05D000246 ORTHO05D005396 2.7e-07 58.5 41 73.2
FAN08G0442 Fragaria x ananassa HOM05D000246 ORTHO05D005396 4.7e-07 57.8 75 41.3
Aa31LG1G3940 Aethionema arabicum HOM05D000246 ORTHO05D005396 6.1e-07 57.4 78 42.3
Lsat_1_v5_gn_9_121000 Lactuca sativa HOM05D000246 ORTHO05D005396 1.0e-06 56.6 88 44.3
A09p17030 Brassica napus HOM05D000246 ORTHO05D005396 1.8e-06 55.8 79 44.3
BraA09t37338Z Brassica rapa HOM05D000246 ORTHO05D005396 1.8e-06 55.8 79 44.3
SGA_v2.0_scaffold131G34453 Striga asiatica HOM05D000246 ORTHO05D005396 1.8e-06 55.8 80 46.2
BcaC04g22293 Brassica carinata HOM05D000246 ORTHO05D005396 2.3e-06 55.5 79 43.0
C09p21060 Brassica napus HOM05D000246 ORTHO05D005396 2.3e-06 55.5 79 43.0
BolC9t55007H Brassica oleracea HOM05D000246 ORTHO05D005396 2.3e-06 55.5 79 43.0
Pp3c2_1760 Physcomitrium patens HOM05D000246 ORTHO05D005396 2.3e-06 55.5 79 41.8


User provided reference genes

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