Gene: Pp3c2_1760

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c2_1760
  • Transcript Identifier Pp3c2_1760V3.2
  • Gene Type Coding gene
  • Location Chr02 : 1149972-1160326 : positive

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c2_1760V3.2
  • pacid 32934973
  • alias Phypa_1048
  • alias Pp1s243_58V6
  • uniprot A0A2K1KZR9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0032508
IBA
GOA DatabaseDNA duplex unwinding
GO:0006310
IBA
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0006281
IBA
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006268
IBA
GOA DatabaseDNA unwinding involved in DNA replication
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g103960.3
GO:0051276
ISO
PLAZA Integrative Orthologychromosome organization AT1G10930
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT1G10930
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT1G10930
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G10930
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT1G10930
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication
GO:0044237
IEA
GOA Databasecellular metabolic process
GO:0044237
IEA
InterProcellular metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009378
IBA
GOA Databasefour-way junction helicase activity
GO:0043138
IBA
IEA
GOA Database3'-5' DNA helicase activity
GO:0043138
IEA
InterPro3'-5' DNA helicase activity
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g103960.3
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005694
IBA
GOA Databasechromosome
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G10930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR004589 DNA helicase, ATP-dependent, RecQ type
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR018982 RQC domain
IPR010997 HRDC-like superfamily
IPR001650 Helicase, C-terminal
IPR002121 HRDC domain
IPR011545 DEAD/DEAH box helicase domain
IPR044876 HRDC domain superfamily
Mapman id Description
13.3.5.5.3.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.helicase component RecQ4A